KEGG   Homo sapiens (human): 5420Help
Entry
5420              CDS       T01001                                 

Gene name
PODXL, Gp200, PC, PCLP, PCLP-1
Definition
(RefSeq) podocalyxin like
  KO
K06817  podocalyxin-like
Organism
hsa  Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09190 Not Included in Pathway or Brite
  09193 Unclassified: signaling and cellular processes
   99995 Signaling proteins
    5420 (PODXL)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: CD34_antigen
Motif
Other DBs
NCBI-GeneID: 5420
NCBI-ProteinID: NP_001018121
OMIM: 602632
HGNC: 9171
Ensembl: ENSG00000128567
Vega: OTTHUMG00000154918
Pharos: O00592(Tbio)
UniProt: O00592 Q96N83
Position
7q32.3
AA seq 558 aa AA seqDB search
MRCALALSALLLLLSTPPLLPSSPSPSPSPSQNATQTTTDSSNKTAPTPASSVTIMATDT
AQQSTVPTSKANEILASVKATTLGVSSDSPGTTTLAQQVSGPVNTTVARGGGSGNPTTTI
ESPKSTKSADTTTVATSTATAKPNTTSSQNGAEDTTNSGGKSSHSVTTDLTSTKAEHLTT
PHPTSPLSPRQPTSTHPVATPTSSGHDHLMKISSSSSTVAIPGYTFTSPGMTTTLLETVF
HHVSQAGLELLTSGDLPTLASQSAGITASSVISQRTQQTSSQMPASSTAPSSQETVQPTS
PATALRTPTLPETMSSSPTAASTTHRYPKTPSPTVAHESNWAKCEDLETQTQSEKQLVLN
LTGNTLCAGGASDEKLISLICRAVKATFNPAQDKCGIRLASVPGSQTVVVKEITIHTKLP
AKDVYERLKDKWDELKEAGVSDMKLGDQGPPEEAEDRFSMPLIITIVCMASFLLLVAALY
GCCHQRLSQRKDQQRLTEELQTVENGYHDNPTLEVMETSSEMQEKKVVSLNGELGDSWIV
PLDNLTKDDLDEEEDTHL
NT seq 1677 nt NT seq  +upstreamnt  +downstreamnt
atgcgctgcgcgctggcgctctcggcgctgctgctactgttgtcaacgccgccgctgctg
ccgtcgtcgccgtcgccgtcgccgtcgccctcccagaatgcaacccagactactacggac
tcatctaacaaaacagcaccgactccagcatccagtgtcaccatcatggctacagataca
gcccagcagagcacagtccccacttccaaggccaacgaaatcttggcctcggtcaaggcg
accacccttggtgtatccagtgactcaccggggactacaaccctggctcagcaagtctca
ggcccagtcaacactaccgtggctagaggaggcggctcaggcaaccctactaccaccatc
gagagccccaagagcacaaaaagtgcagacaccactacagttgcaacctccacagccaca
gctaaacctaacaccacaagcagccagaatggagcagaagatacaacaaactctgggggg
aaaagcagccacagtgtgaccacagacctcacatccactaaggcagaacatctgacgacc
cctcaccctacaagtccacttagcccccgacaacccacttcgacgcatcctgtggccacc
ccaacaagctcgggacatgaccatcttatgaaaatttcaagcagttcaagcactgtggct
atccctggctacaccttcacaagcccggggatgaccaccaccctactagagacagtgttt
caccatgtcagccaggctggtcttgaactcctgacctcgggtgatctgcccaccttggcc
tcccaaagtgctgggattacagcgtcatcggttatctcgcaaagaactcaacagacctcc
agtcagatgccagccagctctacggccccttcctcccaggagacagtgcagcccacgagc
ccggcaacggcattgagaacacctaccctgccagagaccatgagctccagccccacagca
gcatcaactacccaccgataccccaaaacaccttctcccactgtggctcatgagagtaac
tgggcaaagtgtgaggatcttgagacacagacacagagtgagaagcagctcgtcctgaac
ctcacaggaaacaccctctgtgcagggggcgcttcggatgagaaattgatctcactgata
tgccgagcagtcaaagccaccttcaacccggcccaagataagtgcggcatacggctggca
tctgttccaggaagtcagaccgtggtcgtcaaagaaatcactattcacactaagctccct
gccaaggatgtgtacgagcggctgaaggacaaatgggatgaactaaaggaggcaggggtc
agtgacatgaagctaggggaccaggggccaccggaggaggccgaggaccgcttcagcatg
cccctcatcatcaccatcgtctgcatggcatcattcctgctcctcgtggcggccctctat
ggctgctgccaccagcgcctctcccagaggaaggaccagcagcggctaacagaggagctg
cagacagtggagaatggttaccatgacaacccaacactggaagtgatggagacctcttct
gagatgcaggagaagaaggtggtcagcctcaacggggagctgggggacagctggatcgtc
cctctggacaacctgaccaaggacgacctggatgaggaggaagacacacacctctag

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Ontology (1)   
   KEGG BRITE (1)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   UniGene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
   PHAROS (1)   
   VEGA (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (24)   
   RefSeq(nuc) (2)   
   GenBank (11)   
   EMBL (11)   
Protein domain (1)   
   Pfam (1)   
All databases (62)   

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