KEGG   Homo sapiens (human): 5460
Entry
5460              CDS       T01001                                 
Symbol
POU5F1, OCT3, OCT4, OCT4Borf1, OTF-3, OTF3, OTF4, Oct-3, Oct-4, Oct3/4
Name
(RefSeq) POU class 5 homeobox 1
  KO
K09367  POU domain transcription factor, class 5
Organism
hsa  Homo sapiens (human)
Pathway
hsa04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    5460 (POU5F1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hsa03000]
    5460 (POU5F1)
   03021 Transcription machinery [BR:hsa03021]
    5460 (POU5F1)
Transcription factors [BR:hsa03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain POU
    5460 (POU5F1)
Transcription machinery [BR:hsa03021]
 Eukaryotic type
  RNA polymerase III system
   Other transcription-related factors
    Octamer transcription factors
     5460 (POU5F1)
SSDB
Motif
Pfam: Pou Homeodomain Homeobox_KN AcnX HOCHOB
Other DBs
NCBI-GeneID: 5460
NCBI-ProteinID: NP_002692
OMIM: 164177
HGNC: 9221
Ensembl: ENSG00000204531
UniProt: Q01860 D2IYK3
Structure
Position
6:complement(31164337..31170682)
AA seq 360 aa
MAGHLASDFAFSPPPGGGGDGPGGPEPGWVDPRTWLSFQGPPGGPGIGPGVGPGSEVWGI
PPCPPPYEFCGGMAYCGPQVGVGLVPQGGLETSQPEGEAGVGVESNSDGASPEPCTVTPG
AVKLEKEKLEQNPEESQDIKALQKELEQFAKLLKQKRITLGYTQADVGLTLGVLFGKVFS
QTTICRFEALQLSFKNMCKLRPLLQKWVEEADNNENLQEICKAETLVQARKRKRTSIENR
VRGNLENLFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKRSSSDYAQREDFEA
AGSPFSGGPVSFPLAPGPHFGTPGYGSPHFTALYSSVPFPEGEAFPPVSVTTLGSPMHSN
NT seq 1083 nt   +upstreamnt  +downstreamnt
atggcgggacacctggcttcggatttcgccttctcgccccctccaggtggtggaggtgat
gggccaggggggccggagccgggctgggttgatcctcggacctggctaagcttccaaggc
cctcctggagggccaggaatcgggccgggggttgggccaggctctgaggtgtgggggatt
cccccatgccccccgccgtatgagttctgtggggggatggcgtactgtgggccccaggtt
ggagtggggctagtgccccaaggcggcttggagacctctcagcctgagggcgaagcagga
gtcggggtggagagcaactccgatggggcctccccggagccctgcaccgtcacccctggt
gccgtgaagctggagaaggagaagctggagcaaaacccggaggagtcccaggacatcaaa
gctctgcagaaagaactcgagcaatttgccaagctcctgaagcagaagaggatcaccctg
ggatatacacaggccgatgtggggctcaccctgggggttctatttgggaaggtattcagc
caaacgaccatctgccgctttgaggctctgcagcttagcttcaagaacatgtgtaagctg
cggcccttgctgcagaagtgggtggaggaagctgacaacaatgaaaatcttcaggagata
tgcaaagcagaaaccctcgtgcaggcccgaaagagaaagcgaaccagtatcgagaaccga
gtgagaggcaacctggagaatttgttcctgcagtgcccgaaacccacactgcagcagatc
agccacatcgcccagcagcttgggctcgagaaggatgtggtccgagtgtggttctgtaac
cggcgccagaagggcaagcgatcaagcagcgactatgcacaacgagaggattttgaggct
gctgggtctcctttctcagggggaccagtgtcctttcctctggccccagggccccatttt
ggtaccccaggctatgggagccctcacttcactgcactgtactcctcggtccctttccct
gagggggaagcctttccccctgtctccgtcaccactctgggctctcccatgcattcaaac
tga

  All links  
Disease (1)   
   OMIM (1)   
Gene (30)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (23)   
   OC (1)   
Protein sequence (8)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (213)   
   RefSeq(nuc) (5)   
   GenBank (104)   
   EMBL (104)   
3D Structure (12)   
   PDB (12)   
Protein domain (5)   
   Pfam (5)   
All databases (269)   

Download RDF
DBGET integrated database retrieval system