KEGG   Homo sapiens (human): 55432
Entry
55432             CDS       T01001                                 
Symbol
YOD1, DUBA-8, DUBA8, HIN-7, OTUD2, PRO0907
Name
(RefSeq) YOD1 deubiquitinase
  KO
K13719  ubiquitin thioesterase OTU1 [EC:3.1.2.-]
Organism
hsa  Homo sapiens (human)
Pathway
hsa04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    55432 (YOD1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:hsa01002]
    55432 (YOD1)
Peptidases and inhibitors [BR:hsa01002]
 Cysteine peptidases
  Family C88
   55432 (YOD1)
SSDB
Motif
Pfam: zf-C2H2_OTU1_C OTU OTU1_UBXL zf-C2H2_2 Zf-C2H2_ZNF451_5th
Other DBs
NCBI-GeneID: 55432
NCBI-ProteinID: NP_061036
OMIM: 612023
HGNC: 25035
Ensembl: ENSG00000180667
UniProt: Q5VVQ6
Structure
Position
1:complement(207043849..207053116)
AA seq 348 aa
MFGPAKGRHFGVHPAPGFPGGVSQQAAGTKAGPAGAWPVGSRTDTMWRLRCKAKDGTHVL
QGLSSRTRVRELQGQIAAITGIAPGGQRILVGYPPECLDLSNGDTILEDLPIQSGDMLII
EEDQTRPRSSPAFTKRGASSYVRETLPVLTRTVVPADNSCLFTSVYYVVEGGVLNPACAP
EMRRLIAQIVASDPDFYSEAILGKTNQEYCDWIKRDDTWGGAIEISILSKFYQCEICVVD
TQTVRIDRFGEDAGYTKRVLLIYDGIHYDPLQRNFPDPDTPPLTIFSSNDDIVLVQALEL
ADEARRRRQFTDVNRFTLRCMVCQKGLTGQAEAREHAKETGHTNFGEV
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgtttggccccgctaaaggtcgccattttggagtccacccggcgcctggtttccccggc
ggcgtctcccaacaggctgccgggaccaaagctggccccgcgggtgcctggcctgtgggc
agccggaccgacacgatgtggcggctccgctgcaaggccaaggacggcacccatgttttg
caggggctgtccagccggacccgggtgcgggaactccagggccaaattgccgccatcacc
gggatcgcccccggcggtcagcgaatcctcgtcggataccctcccgagtgcctggatctc
agcaatggggataccattctggaagacttgcccatccaatctggtgacatgctgatcatt
gaagaagaccaaaccaggcccagaagttcacctgcatttactaaacgtggtgcttctagt
tacgtcagggaaactttgcctgtgcttaccagaaccgtggtcccagcagacaactcttgc
ctctttactagtgtgtactatgtcgtcgaaggaggagtcttgaatccagcttgtgcccct
gagatgagacgcctcatagcacaaattgtagcaagcgatccagacttctatagtgaggca
atactgggaaaaacaaatcaagagtactgtgactggatcaaaagggatgacacttgggga
ggagcaatagagatatcgattttgtccaagttttaccaatgtgaaatatgtgtagtggat
acacagacagtaagaattgatcgttttggggaagatgcaggatataccaaaagggttctg
cttatttatgatggcatccactatgatccacttcagcgtaacttccctgatccagataca
cctcctctgaccattttctcctctaatgatgatattgttcttgtacaagcactggaatta
gcagatgaagctagaagaaggagacagtttactgatgtcaaccgcttcaccctgagatgc
atggtatgtcagaaaggattaactggacaagcagaagcaagggaacatgccaaggagaca
ggccataccaactttggagaagtgtga

  All links  
Disease (1)   
   OMIM (1)   
Gene (15)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (8)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (12)   
   RefSeq(nuc) (4)   
   GenBank (4)   
   EMBL (4)   
3D Structure (3)   
   PDB (3)   
Protein domain (5)   
   Pfam (5)   
All databases (42)   

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