KEGG   Homo sapiens (human): 55432
Entry
55432             CDS       T01001                                 

Symbol
YOD1, DUBA8, OTUD2, PRO0907
Name
(RefSeq) YOD1 deubiquitinase
  KO
K13719  ubiquitin thioesterase OTU1 [EC:3.1.2.-]
Organism
hsa  Homo sapiens (human)
Pathway
hsa04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    55432 (YOD1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:hsa01002]
    55432 (YOD1)
Enzymes [BR:hsa01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.2  Thioester hydrolases
    3.1.2.-  
     55432 (YOD1)
Peptidases and inhibitors [BR:hsa01002]
 Cysteine peptidases
  Family C88
   55432 (YOD1)
SSDB
Motif
Pfam: OTU zf-C2H2_2 Ubiquitin_2
Other DBs
NCBI-GeneID: 55432
NCBI-ProteinID: NP_061036
OMIM: 612023
HGNC: 25035
Ensembl: ENSG00000180667
Vega: OTTHUMG00000036032
Pharos: Q5VVQ6(Tbio)
UniProt: Q5VVQ6
Structure
PDB: 
4BOQ 4BOS 4BOZ

Position
1q32.1
AA seq 348 aa
MFGPAKGRHFGVHPAPGFPGGVSQQAAGTKAGPAGAWPVGSRTDTMWRLRCKAKDGTHVL
QGLSSRTRVRELQGQIAAITGIAPGGQRILVGYPPECLDLSNGDTILEDLPIQSGDMLII
EEDQTRPRSSPAFTKRGASSYVRETLPVLTRTVVPADNSCLFTSVYYVVEGGVLNPACAP
EMRRLIAQIVASDPDFYSEAILGKTNQEYCDWIKRDDTWGGAIEISILSKFYQCEICVVD
TQTVRIDRFGEDAGYTKRVLLIYDGIHYDPLQRNFPDPDTPPLTIFSSNDDIVLVQALEL
ADEARRRRQFTDVNRFTLRCMVCQKGLTGQAEAREHAKETGHTNFGEV
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgtttggccccgctaaaggtcgccattttggagtccacccggcgcctggtttccccggc
ggcgtctcccaacaggctgccgggaccaaagctggccccgcgggtgcctggcctgtgggc
agccggaccgacacgatgtggcggctccgctgcaaggccaaggacggcacccatgttttg
caggggctgtccagccggacccgggtgcgggaactccagggccaaattgccgccatcacc
gggatcgcccccggcggtcagcgaatcctcgtcggataccctcccgagtgcctggatctc
agcaatggggataccattctggaagacttgcccatccaatctggtgacatgctgatcatt
gaagaagaccaaaccaggcccagaagttcacctgcatttactaaacgtggtgcttctagt
tacgtcagggaaactttgcctgtgcttaccagaaccgtggtcccagcagacaactcttgc
ctctttactagtgtgtactatgtcgtcgaaggaggagtcttgaatccagcttgtgcccct
gagatgagacgcctcatagcacaaattgtagcaagcgatccagacttctatagtgaggca
atactgggaaaaacaaatcaagagtactgtgactggatcaaaagggatgacacttgggga
ggagcaatagagatatcgattttgtccaagttttaccaatgtgaaatatgtgtagtggat
acacagacagtaagaattgatcgttttggggaagatgcaggatataccaaaagggttctg
cttatttatgatggcatccactatgatccacttcagcgtaacttccctgatccagataca
cctcctctgaccattttctcctctaatgatgatattgttcttgtacaagcactggaatta
gcagatgaagctagaagaaggagacagtttactgatgtcaaccgcttcaccctgagatgc
atggtatgtcagaaaggattaactggacaagcagaagcaagggaacatgccaaggagaca
ggccataccaactttggagaagtgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (8)   
   OC (1)   
   PHAROS (1)   
   VEGA (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (10)   
   RefSeq(nuc) (2)   
   GenBank (4)   
   EMBL (4)   
Protein domain (3)   
   Pfam (3)   
All databases (41)   

Download RDF
DBGET integrated database retrieval system