KEGG   Homo sapiens (human): 56980
Entry
56980             CDS       T01001                                 
Symbol
PRDM10, BHD2, PFM7, TRIS
Name
(RefSeq) PR/SET domain 10
  KO
K24643  PR domain zinc finger protein 10 [EC:2.1.1.-]
Organism
hsa  Homo sapiens (human)
Disease
H00818  Birt-Hogg-Dube syndrome
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hsa03000]
    56980 (PRDM10)
Transcription factors [BR:hsa03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 PRDM
    56980 (PRDM10)
SSDB
Motif
Pfam: zf-C2H2 PRDM2_PR zf-C2H2_4 zf-H2C2_2 zf-C2H2_jaz zf-C2H2_6 zf-C2H2_2 zf-met Zn_ribbon_PRDM4 SET Zf-C2H2_ZNF451 zf-Di19 DUF629 zf-C2H2_STOP2_C zf-C2H2_12 RNA_pol_3_Rpc31 zf-C2H2_7th_ZNF462
Other DBs
NCBI-GeneID: 56980
NCBI-ProteinID: NP_955469
OMIM: 618319
HGNC: 13995
Ensembl: ENSG00000170325
UniProt: Q9NQV6
Structure
Position
11:complement(129899711..130002835)
AA seq 1156 aa
MDSKDESSHVWPTSAEHEQNAAQVHFVPDTGTVAQIVYTDDQVRPPQQVVYTADGASYTS
VDGPEHTLVYIHPVEAAQTLFTDPGQVAYVQQDATAQQASLPVHNQVLPSIESVDGSDPL
ATLQTPLGRLEAKEEEDEDEDEDTEEDEEEDGEDTDLDDWEPDPPRPFDPHDLWCEECNN
AHASVCPKHGPLHPIPNRPVLTRARASLPLVLYIDRFLGGVFSKRRIPKRTQFGPVEGPL
VRGSELKDCYIHLKVSLDKGDRKERDLHEDLWFELSDETLCNWMMFVRPAQNHLEQNLVA
YQYGHHVYYTTIKNVEPKQELKVWYAASYAEFVNQKIHDISEEERKVLREQEKNWPCYEC
NRRFISSEQLQQHLNSHDEKLDVFSRTRGRGRGRGKRRFGPGRRPGRPPKFIRLEITSEN
GEKSDDGTQDLLHFPTKEQFDEAEPATLNGLDQPEQTTIPIPQLPQETQSSLEHEPETHT
LHLQPQHEESVVPTQSTLTADDMRRAKRIRNAALQHLFIRKSFRPFKCLQCGKAFREKDK
LDQHLRFHGREGNCPLTCDLCNKGFISSTSLESHMKLHSDQKTYSCIFCPESFDRLDLLK
DHVAIHINDGYFTCPTCKKRFPDFIQVKKHVRSFHSEKIYQCTECDKAFCRPDKLRLHML
RHSDRKDFLCSTCGKQFKRKDKLREHMQRMHNPEREAKKADRISRSKTFKPRITSTDYDS
FTFKCRLCMMGFRRRGMLVNHLSKRHPDMKIEEVPELTLPIIKPNRDYFCQYCDKVYKSA
SKRKAHILKNHPGAELPPSIRKLRPAGPGEPDPMLSTHTQLTGTIATPPVCCPHCSKQYS
SKTKMVQHIRKKHPEFAQLSNTIHTPLTTAVISATPAVLTTDSATGETVVTTDLLTQAMT
ELSQTLTTDYRTPQGDYQRIQYIPVSQSASGLQQPQHIQLQVVQVASATSPHQSQQSTVD
VGQLHDPQPYPQHAIQVQHIQVSEPTASAPSSAQVSGQPLSPSAQQAQQGLSPSHIQGSS
STQGQALQQQQQQQQNSSVQHTYLPSAWNSFRGYSSEIQMMTLPPGQFVITDSGVATPVT
TGQVKAVTSGHYVLSESQSELEEKQTSALSGGVQVEPPAHSDSLDPQTNSQQQTTQYIIT
TTTNGNGSSEVHITKP
NT seq 3471 nt   +upstreamnt  +downstreamnt
atggattccaaagatgaaagctcgcatgtgtggccgacatctgcagagcatgaacagaat
gccgcacaggtgcactttgttccggacacaggaacagtggctcagattgtctataccgat
gaccaggttcgccccccacagcaggtggtgtacacggcagatggtgcctcctacacatca
gtggatggtccagagcacacgctggtgtacatccacccggtggaagctgcacagactctg
tttacagaccccggccaggtagcttatgtccaacaggatgctacagctcagcaggcctca
ttgccagttcataaccaggtgctgccttccatcgagagtgtagatgggtccgaccctttg
gcaactctgcagacccctctaggcagactggaggccaaagaggaagaggatgaggatgag
gacgaggacactgaggaagatgaggaagaagacggtgaggacacggatctggatgactgg
gagccagacccgccccggcccttcgacccacacgacttgtggtgtgaggagtgcaataac
gcgcatgcttcagtgtgtccgaagcacggccccttgcacccgatccccaaccggccggtg
ctcacccgggccagggcgagcctccccctggtgctctacatagacaggtttctgggcggg
gtgttctccaagcggcgcatccccaagcgcacccagtttggccccgtggaggggcctctc
gtcaggggctcggagctgaaagactgttacattcacctcaaggtttctcttgataaaggg
gacaggaaagaaagggatttacatgaagacctatggtttgagttgtctgatgagacgctt
tgtaactggatgatgtttgtacggccagcccagaatcacctggagcagaacctggtggct
taccagtatggccaccatgtgtattatacaaccataaaaaatgtggagcccaagcaggaa
ctgaaggtgtggtatgccgcatcctatgctgagttcgtgaaccagaaaattcatgacatt
tctgaggaagaaaggaaagttcttcgagagcaagagaagaattggccctgctatgaatgt
aaccgccgatttataagctcggagcagttgcaacagcatctcaattctcatgatgagaaa
ctagatgtgtttagcagaacaagaggcagaggaaggggacgaggcaagaggcgattcggt
ccaggtcgacggccggggcgtcctccaaaatttatccgcctggaaatcaccagcgaaaat
ggggaaaagagtgacgatgggacacaggacttgctacattttcccacaaaggagcaattt
gatgaggctgaaccagccactctgaatgggctggatcaaccagaacagaccactatccca
atccctcagctgccacaggaaacccagtcttccctggaacatgaaccagaaactcacacc
ctgcacctgcagccgcagcatgaagagagcgtggtgcccacccagagcacgctgacagcc
gacgacatgcgcagagccaagcgcatccgaaatgcagctcttcagcatctgtttattcgg
aagtccttccggccttttaaatgcttgcagtgtgggaaggccttccgggaaaaggacaaa
ctggaccagcacttacgcttccatgggcgggaggggaactgcccactgacctgtgatctc
tgtaacaagggcttcatcagcagcacatccttggagagccacatgaagctccactcagac
cagaagacttactcttgcattttttgcccagaatcctttgaccgccttgatttgttgaaa
gatcatgtggccattcatatcaatgatggctacttcacctgcccaacttgtaagaaacgg
ttcccagattttatccaggtgaaaaaacacgtgcgcagcttccactcagaaaagatctac
cagtgcacagagtgtgacaaggccttctgtcgccccgataaactgcgactccacatgctc
cggcattcggaccgcaaagacttcctgtgttccacctgtgggaagcaatttaagcgaaaa
gacaaactacgggaacacatgcagaggatgcataatcctgagagggaggccaagaaagcc
gaccgcatcagccgctccaagacgttcaagccccgcatcacgtccacagactacgacagc
ttcacgttcaagtgccgcctgtgcatgatgggcttccggcggcgcggcatgctggtaaat
cacttatcgaagagacacccagacatgaagatagaagaggtgccagagttaactctaccc
atcataaaacccaatcgtgattacttttgtcagtattgcgataaggtttataaaagtgcc
agcaagcgcaaagcccacattctgaagaaccacccaggagcagagctcccaccgagcatt
cggaagctccgacccgctggtcctggagagccagaccccatgctgagcacacacacccag
ctgacgggcaccatcgccacccctcccgtctgctgtccccactgctccaagcagtacagc
agcaagaccaagatggtccagcacattcgaaagaagcatccagagttcgcccagctctcc
aacaccatacacacaccactgacgacagctgtgatcagtgccaccccagcggttttgact
acagacagcgccactggagagactgtggtgacgacggacctgctcacccaagcaatgaca
gaactgtcccagaccttaacgacagactaccgaacgccacaaggggattaccagagaatt
cagtacatccctgtgtcgcagtcggcgtctggcctccagcagcctcagcacatacagctg
caagtggttcaagtggcctcggccacttcccctcaccagtcacagcagtccactgtggat
gttggccagctccatgatcctcagccctacccccagcacgccatccaggtgcagcacatc
caggtcagcgagcctaccgcctcggccccgtcctccgcccaggtatctgggcagccgttg
agtccctcagcccagcaggctcagcaggggctcagcccctcccacatccagggcagttct
tccacacaggggcaggctctgcagcagcagcagcagcagcagcagaattcctctgtgcag
cacacgtacctgcccagtgcttggaattccttccgtggctattcatctgagattcaaatg
atgacgcttcctccgggtcagtttgtgattacagacagtggtgtggcaactccagttact
actggccaggtgaaggcggttacttcgggtcattatgtgttatcagaaagtcaatcagaa
ttggaagaaaagcaaacttctgccctctctggtggagtccaggtcgagccacctgcacac
agtgactccctggacccccagaccaacagccaacagcagaccacacagtacatcatcacc
accaccaccaacgggaacggaagcagcgaagtgcatatcaccaaaccatga

  All links  
Disease (2)   
   OMIM (2)   
Gene (19)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (22)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (20)   
DNA sequence (44)   
   RefSeq(nuc) (20)   
   GenBank (12)   
   EMBL (12)   
3D Structure (1)   
   PDB (1)   
Protein domain (17)   
   Pfam (17)   
All databases (105)   

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