KEGG   Homo sapiens (human): 57492
Entry
57492             CDS       T01001                                 
Symbol
ARID1B, 6A3-5, BAF250B, BRIGHT, CSS1, DAN15, ELD/OSA1, MRD12, OSA2, P250R, SMARCF2
Name
(RefSeq) AT-rich interaction domain 1B
  KO
K11653  AT-rich interactive domain-containing protein 1
Organism
hsa  Homo sapiens (human)
Pathway
hsa03082  ATP-dependent chromatin remodeling
hsa04714  Thermogenesis
hsa05225  Hepatocellular carcinoma
Network
nt06529  Thermogenesis
  Element
N01688  ADRB3-UCP1 signaling pathway
Disease
H00773  Autosomal dominant intellectual developmental disorder
H01403  Coffin-Siris syndrome
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    57492 (ARID1B)
 09150 Organismal Systems
  09159 Environmental adaptation
   04714 Thermogenesis
    57492 (ARID1B)
 09160 Human Diseases
  09162 Cancer: specific types
   05225 Hepatocellular carcinoma
    57492 (ARID1B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hsa03000]
    57492 (ARID1B)
   03021 Transcription machinery [BR:hsa03021]
    57492 (ARID1B)
   03036 Chromosome and associated proteins [BR:hsa03036]
    57492 (ARID1B)
Transcription factors [BR:hsa03000]
 Eukaryotic type
  Helix-turn-helix
   ARID
    57492 (ARID1B)
Transcription machinery [BR:hsa03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     57492 (ARID1B)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    57492 (ARID1B)
SSDB
Motif
Pfam: BAF250_C ARID
Other DBs
NCBI-GeneID: 57492
NCBI-ProteinID: NP_059989
OMIM: 614556
HGNC: 18040
Ensembl: ENSG00000049618
UniProt: Q8NFD5
Structure
Position
6:156776026..157210779
AA seq 2319 aa
MAARAAAAAAAAAARARARAGSGERRAPPGPRPAPGARDLEAGARGAAAAAAAPGPMLGG
GGDGGGGLNSVHHHPLLPRHELNMAHNAGAAAAAGTHSAKSGGSEAALKEGGSAAALSSS
SSSSAAAAAASSSSSSGPGSAMETGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHHHHHA
HHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQP
QHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAV
PGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAP
GSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAG
AVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGS
AAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQA
AAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSP
MDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQ
QQMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYG
TRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQG
DQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPG
SQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISS
FQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQP
CGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVM
QAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAAS
VGLADMMSPGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEPERK
LWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLN
VGTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQ
GPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPK
RNSMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMY
NQSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQP
NYKRHMDGMYGPPAKRHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRE
RMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPTQAPPY
PGMNRTDDMMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQTPPSLPNHI
SRAPSPASFQRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPPPIRREITFPP
GSVEASQPVLKQRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVAT
FNLSQLSGFLELLVEYFRKCLIDIFGILMEYEVGDPSQKALDHNAARKDDSQSLADDSGK
EEEDAECIDDDEEDEEDEEEDSEKTESDEKSSIALTAPDAAADPKEKPKQASKFDKLPIK
IVKKNNLFVVDRSDKLGRVQEFNSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPL
SSAGRKKEQEGKGDSEEQQEKSIIATIDDVLSARPGALPEDANPGPQTESSKFPFGIQQA
KSHRNIKLLEDEPRSRDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPG
LVLILGKLILLHHEHPERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLAN
ISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLS
IQDNNVDLILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIA
VQKGSIGNLISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDE
NRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQIGQL
NT seq 6960 nt   +upstreamnt  +downstreamnt
atggccgcgcgggcagcagcggcggcggcggcggcggcggcgcgggcgcgggcgcgggca
ggcagcggcgaacggcgggcgccccccgggccgcggccggcgcccggagcccgggacctg
gaggcgggggcgcgcggcgcggcggcggcggcggcggcaccgggacccatgctggggggc
ggcggcgacggcggcggcggcctgaacagtgtgcaccaccaccccctgctcccccgtcac
gaactcaacatggcccataacgcgggcgccgcggccgccgccggcacccacagcgccaag
agcggcggctccgaggcggctctcaaggagggtggaagcgccgccgcgctgtcctcctcc
tcctcctcctccgcggcggcagcggcggcatcctcttcctcctcgtcgggcccgggctcg
gccatggagacggggctgctccccaaccacaaactgaaaaccgttggcgaagcccccgcc
gcgccgccccaccagcagcaccaccaccaccaccatgcccaccaccaccaccaccatgcc
caccacctccaccaccaccacgcactacagcagcagctaaaccagttccagcagcagcag
cagcagcagcaacagcagcagcagcagcagcagcaacagcaacatcccatttccaacaac
aacagcttgggcggcgcgggcggcggcgcgcctcagcccggccccgacatggagcagccg
caacatggaggcgccaaggacagtgctgcgggcggccaggccgaccccccgggcccgccg
ctgctgagcaagccgggcgacgaggacgacgcgccgcccaagatgggggagccggcgggc
ggccgctacgagcacccgggcttgggcgccctgggcacgcagcagccgccggtcgccgtg
cccgggggcggcggcggcccggcggccgtcccggagtttaataattactatggcagcgct
gcccctgcgagcggcggccccggcggccgcgctgggccttgctttgatcaacatggcgga
caacaaagccccgggatggggatgatgcactccgcctccgccgccgccgccggggccccc
ggcagcatggaccccctgcagaactcccacgaagggtaccccaacagccagtgcaaccat
tatccgggctacagccggcccggcgcgggcggcggcggcggcggcggcggcggaggagga
ggaggcagcggaggaggaggaggaggaggaggagcaggagcaggaggagcaggagcggga
gctgtggcggcggcggccgcggcggcggcggcagcagcaggaggcggcggcggcggcggc
tatgggggctcgtccgcggggtacggggtgctgagctccccccggcagcagggcggcggc
atgatgatgggccccgggggcggcggggccgcgagcctcagcaaggcggccgccggctcg
gcggcggggggcttccagcgcttcgccggccagaaccagcacccgtcgggggccaccccg
accctcaatcagctgctcacctcgcccagccccatgatgcggagctacggcggcagctac
cccgagtacagcagccccagcgcgccgccgccgccgccgtcgcagccccagtcccaggcg
gcggcggcgggggcggcggcgggcggccagcaggcggccgcgggcatgggcttgggcaag
gacatgggcgcccagtacgccgctgccagcccggcctgggcggccgcgcaacaaaggagt
cacccggcgatgagccccggcacccccggaccgaccatgggcagatcccagggcagccca
atggatccaatggtgatgaagagacctcagttgtatggcatgggcagtaaccctcattct
cagcctcagcagagcagtccgtacccaggaggttcctatggccctccaggcccacagcgg
tatccaattggcatccagggtcggactcccggggccatggccggaatgcagtaccctcag
cagcagatgccacctcagtatggacagcaaggtgtgagtggttactgccagcagggccaa
cagccatattacagccagcagccgcagcccccgcacctcccaccccaggcgcagtatctg
ccgtcccagtcccagcagaggtaccagccgcagcaggacatgtctcaggaaggctatgga
actagatctcaacctcctctggcccccggaaaacctaaccatgaagacttgaacttaata
cagcaagaaagaccatcaagtttaccagatctgtctggctccattgatgacctccccacg
ggaacggaagcaactttgagctcagcagtcagtgcatccgggtccacgagcagccaaggg
gatcagagcaacccggcgcagtcgcctttctccccacatgcgtcccctcatctctccagc
atcccggggggcccatctccctctcctgttggctctcctgtaggaagcaaccagtctcga
tctggcccaatctctcctgcaagtatcccaggtagtcagatgcctccgcagccacccggg
agccagtcagaatccagttcccatcccgccttgagccagtcaccaatgccacaggaaaga
ggttttatggcaggcacacaaagaaaccctcagatggctcagtatggacctcaacagaca
ggaccatccatgtcgcctcatccttctcctgggggccagatgcatgctggaatcagtagc
tttcagcagagtaactcaagtgggacttacggtccacagatgagccagtatggaccacaa
ggtaactactccagacccccagcgtatagtggggtgcccagtgcaagctacagcggccca
gggcccggtatgggtatcagtgccaacaaccagatgcatggacaagggccaagccagcca
tgtggtgctgtgcccctgggacgaatgccatcagctgggatgcagaacagaccatttcct
ggaaatatgagcagcatgacccccagttctcctggcatgtctcagcagggagggccagga
atggggccgccaatgccaactgtgaaccgtaaggcacaggaggcagccgcagcagtgatg
caggctgctgcgaactcagcacaaagcaggcaaggcagtttccccggcatgaaccagagt
ggacttatggcttccagctctccctacagccagcccatgaacaacagctctagcctgatg
aacacgcaggcgccgccctacagcatggcgcccgccatggtgaacagctcggcagcatct
gtgggtcttgcagatatgatgtctcctggtgaatccaaactgcccctgcctctcaaagca
gacggcaaagaagaaggcactccacagcccgagagcaagtcaaagaagtccagctcctcc
accactactggggagaagatcacgaaggtgtacgagctggggaatgagccagagagaaag
ctctgggtcgaccgatacctcaccttcatggaagagagaggctctcctgtctcaagtctg
cctgccgtgggcaagaagcccctggacctgttccgactctacgtctgcgtcaaagagatc
gggggtttggcccaggttaataaaaacaagaagtggcgtgagctggcaaccaacctaaac
gttggcacctcaagcagtgcagcgagctccctgaaaaagcagtatattcagtacctgttt
gcctttgagtgcaagatcgaacgtggggaggagcccccgccggaagtcttcagcaccggg
gacaccaaaaagcagcccaagctccagccgccatctcctgctaactcgggatccttgcaa
ggcccacagaccccccagtcaactggcagcaattccatggcagaggttccaggtgacctg
aagccacctaccccagcctccacccctcacggccagatgactccaatgcaaggtggaaga
agcagtacaatcagtgtgcacgacccattctcagatgtgagtgattcatccttcccgaaa
cggaactccatgactccaaacgccccctaccagcagggcatgagcatgcccgatgtgatg
ggcaggatgccctatgagcccaacaaggacccctttgggggaatgagaaaagtgcctgga
agcagcgagccctttatgacgcaaggacagatgcccaacagcagcatgcaggacatgtac
aaccaaagtccctccggagcaatgtctaacctgggcatggggcagcgccagcagtttccc
tatggagccagttacgaccgaaggcatgaaccttatgggcagcagtatccaggccaaggc
cctccctcgggacagccgccgtatggagggcaccagcccggcctgtacccacagcagccg
aattacaaacgccatatggacggcatgtacgggcccccagccaagcgccacgagggcgac
atgtacaacatgcagtacagcagccagcagcaggagatgtacaaccagtatggaggctcc
tactcgggcccggaccgcaggcccatccagggccagtacccgtatccctacagcagggag
aggatgcagggcccggggcagatccagacacacggaatcccgcctcagatgatgggcggc
ccgctgcagtcgtcctccagtgaggggcctcagcagaatatgtgggcagcacgcaatgat
atgccttatccctaccagaacaggcagggccctggcggccctacacaggcgcccccttac
ccaggcatgaaccgcacagacgatatgatggtacccgatcagaggataaatcatgagagc
cagtggccttctcacgtcagccagcgtcagccttatatgtcgtcctcagcctccatgcag
cccatcacacgcccaccacagccgtcctaccagacgccaccgtcactgccaaatcacatc
tccagggcgcccagcccagcgtccttccagcgctccctggagaaccgcatgtctccaagc
aagtctccttttctgccgtctatgaagatgcagaaggtcatgcccacggtccccacatcc
caggtcaccgggccaccaccccaaccacccccaatcagaagggagatcacctttcctcct
ggctcagtagaagcatcacaaccagtcttgaaacaaaggcgaaagattacctccaaagat
atcgttactcctgaggcgtggcgtgtgatgatgtcccttaaatcaggtcttttggctgag
agtacgtgggctttggacactattaatattcttctgtatgatgacagcactgttgctact
ttcaatctctcccagttgtctggatttctcgaacttttagtcgagtactttagaaaatgc
ctgattgacatttttggaattcttatggaatatgaagtgggagaccccagccaaaaagca
cttgatcacaacgcagcaaggaaggatgacagccagtccttggcagacgattctgggaaa
gaggaggaagatgctgaatgtattgatgacgacgaggaagacgaggaggatgaggaggaa
gacagcgagaagacagaaagcgatgaaaagagcagcatcgctctgactgccccggacgcc
gctgcagacccaaaggagaagcccaagcaagccagtaagttcgacaagctgccaataaag
atagtcaaaaagaacaacctgtttgttgttgaccgatctgacaagttggggcgtgtgcag
gagttcaatagtggccttctgcactggcagctcggcgggggtgacaccaccgagcacatt
cagactcactttgagagcaagatggaaattcctcctcgcaggcgcccacctcccccctta
agctccgcaggtagaaagaaagagcaagaaggcaaaggcgactctgaagagcagcaagag
aaaagcatcatagcaaccatcgatgacgtcctctctgctcggccaggggcattgcctgaa
gacgcaaaccctgggccccagaccgaaagcagtaagtttccctttggtatccagcaagcc
aaaagtcaccggaacatcaagctgctggaggacgagcccaggagccgagacgagactcct
ctgtgtaccatcgcgcactggcaggactcgctggctaagcgatgcatctgtgtgtccaat
attgtccgtagcttgtcattcgtgcctggcaatgatgccgaaatgtccaaacatccaggc
ctggtgctgatcctggggaagctgattcttcttcaccacgagcatccagagagaaagcga
gcaccgcagacctatgagaaagaggaggatgaggacaagggggtggcctgcagcaaagat
gagtggtggtgggactgcctcgaggtcttgagggataacacgttggtcacgttggccaac
atttccgggcagctagacttgtctgcttacacggaaagcatctgcttgccaattttggat
ggcttgctgcactggatggtgtgcccgtctgcagaggcacaagatccctttccaactgtg
ggacccaactcggtcctgtcgcctcagagacttgtgctggagaccctctgtaaactcagt
atccaggacaataatgtggacctgatcttggccactcctccatttagtcgtcaggagaaa
ttctatgctacattagttaggtacgttggggatcgcaaaaacccagtctgtcgagaaatg
tccatggcgcttttatcgaaccttgcccaaggggacgcactagcagcaagggccatagct
gtgcagaaaggaagcattggaaacttgataagcttcctagaggatggggtcacgatggcc
cagtaccagcagagccagcacaacctcatgcacatgcagcccccgcccctggaaccacct
agcgtagacatgatgtgcagggcggccaaggctttgctagccatggccagagtggacgaa
aaccgctcggaattccttttgcacgagggccggttgctggatatctcgatatcagctgtc
ctgaactctctggttgcatctgtcatctgtgatgtactgtttcagattgggcagttatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Network (2)   
   KEGG NETWORK (2)   
Disease (4)   
   KEGG DISEASE (2)   
   OMIM (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (56)   
   KEGG ORTHOLOGY (1)   
   RefGene (49)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (71)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (69)   
DNA sequence (95)   
   RefSeq(nuc) (69)   
   GenBank (13)   
   EMBL (13)   
3D Structure (2)   
   PDB (2)   
Protein domain (2)   
   Pfam (2)   
All databases (240)   

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