KEGG   Homo sapiens (human): 5989
Entry
5989              CDS       T01001                                 
Symbol
RFX1, EFC, RFX
Name
(RefSeq) regulatory factor X1
  KO
K09173  regulatory factor X 1/2/3
Organism
hsa  Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hsa03000]
    5989 (RFX1)
Transcription factors [BR:hsa03000]
 Eukaryotic type
  Other basic domains
   RF-X
    5989 (RFX1)
SSDB
Motif
Pfam: RFX1_trans_act RFX_DNA_binding
Other DBs
NCBI-GeneID: 5989
NCBI-ProteinID: NP_002909
OMIM: 600006
HGNC: 9982
Ensembl: ENSG00000132005
UniProt: P22670
Structure
Position
19:complement(13961530..14006816)
AA seq 979 aa
MATQAYTELQAAPPPSQPPQAPPQAQPQPPPPPPPAAPQPPQPPTAAATPQPQYVTELQS
PQPQAQPPGGQKQYVTELPAVPAPSQPTGAPTPSPAPQQYIVVTVSEGAMRASETVSEAS
PGSTASQTGVPTQVVQQVQGTQQRLLVQTSVQAKPGHVSPLQLTNIQVPQQALPTQRLVV
QSAAPGSKGGQVSLTVHGTQQVHSPPEQSPVQANSSSSKTAGAPTGTVPQQLQVHGVQQS
VPVTQERSVVQATPQAPKPGPVQPLTVQGLQPVHVAQEVQQLQQVPVPHVYSSQVQYVEG
GDASYTASAIRSSTYSYPETPLYTQTASTSYYEAAGTATQVSTPATSQAVASSGSMPMYV
SGSQVVASSTSTGAGASNSSGGGGSGGGGGGGGGGGGGGSGSTGGGGSGAGTYVIQGGYM
LGSASQSYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASF
GKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKASSPLLRLMEDQQHMAMRGQPFSQKQRL
KPIQKMEGMTNGVAVGQQPSTGLSDISAQVQQYQQFLDASRSLPDFTELDLQGKVLPEGV
GPGDIKAFQVLYREHCEAIVDVMVNLQFTLVETLWKTFWRYNLSQPSEAPPLAVHDEAEK
RLPKAILVLLSKFEPVLQWTKHCDNVLYQGLVEILIPDVLRPIPSALTQAIRNFAKSLES
WLTHAMVNIPEEMLRVKVAAAGAFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLSDLNR
VDFANVQEQASWVCRCEDRVVQRLEQDFKVTLQQQNSLEQWAAWLDGVVSQVLKPYQGSA
GFPKAAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGE
TPIAVMGEFANLATSLNPLDPDKDEEEEEEEESEDELPQDISLAAGGESPALGPETLEPP
AKLARTDARGLFVQALPSS
NT seq 2940 nt   +upstreamnt  +downstreamnt
atggcaacacaggcgtatactgagctacaggcagccccgccaccatcccagccgccacag
gccccgccacaagcccagccccagccgccaccgccaccacccccagcggcaccccagccc
ccgcagccacccaccgctgctgccacccctcagccccaatatgtcaccgagctgcagagc
ccccagccccaggcacagccaccgggtggccagaagcagtacgtgacggagctcccggct
gtacccgcaccctcgcagccaaccggtgcacccaccccttcgcctgcaccccagcagtac
atcgtggtcactgtctctgaaggtgccatgcgggccagcgagacagtgtcggaggccagc
cccggctccaccgccagccagaccggcgttcctactcaggtggttcagcaggtgcagggc
acccagcagcggctgctggtccagacgagcgtgcaggccaagccaggccacgtgtcgccc
ctccagctgaccaacatccaagtgccccagcaggctcttcccacgcagcgtctggtggtg
cagagcgcagccccaggcagcaaaggtggccaggtctccctgacggtccatggtacccag
caggtgcactcgcccccagagcagtcgccggtgcaggccaacagctcttccagcaagaca
gccggggcccccacgggcacagtgccacagcagctgcaggtccacggcgtccagcagagt
gtccccgtcacccaagagagatctgtggtccaggccactccacaagcgcccaaacccggc
ccggtgcagccgctgaccgtgcagggcctccagccagtccacgtggctcaagaggtgcag
cagctccagcaggtgcccgtcccacacgtgtactccagccaggtgcagtatgtggagggc
ggcgatgccagctacacggccagtgccatccgttccagcacctactcctatcccgagacg
ccgctgtacacgcagacggcaagcaccagctactacgaggccgcaggcacggccacccag
gtcagcacccccgccacctcccaggcggtggccagcagtggctccatgcccatgtacgtg
tccggcagccaggtcgtcgccagctccaccagcactggggctggggccagcaacagcagc
ggaggtggtggcagtggtggtggcggcggcggcgggggaggcggtggcgggggtggcagt
ggcagcaccggaggcggcggcagcggagcaggcacctacgtgatccaaggcggctacatg
ctgggcagtgccagccagtcttactctcacaccacccgtgcctcgccagccacggtccag
tggctcctggacaactatgagacggctgagggcgtgagtctgccacggagcaccctctac
tgccactacttactgcactgccaggagcagaagctggagcccgtcaacgccgcctccttc
ggcaagctcatccgctccgtcttcatgggcctgcgaacccgccgtctgggcaccaggggc
aactccaagtaccactactatggcctgcgcatcaaggccagctcacccctgctgcggctg
atggaggaccagcagcacatggccatgcggggccagcccttctcgcagaagcagaggctc
aagcccatccagaagatggaaggcatgaccaacggcgtggcggtggggcagcagccgagc
acggggctgtcggacatcagcgcccaggtgcagcagtaccagcaatttttggatgcctct
cggagcctccctgacttcacagagctcgacctccagggcaaggtgctgcctgagggcgtc
gggcccggggacatcaaagccttccaggtcctgtaccgggaacactgtgaggccattgtc
gacgtcatggtgaacctgcagttcaccctggtggagacgctgtggaagaccttctggagg
tacaacctcagccagcccagtgaggcgccaccgctggctgtacatgacgaggccgagaag
cgactgcccaaagccatcctggtgctcctctccaagttcgagcccgtgctccaatggacc
aagcactgtgacaacgtgctgtaccagggcctggtggaaatcctcattcccgacgtgctg
cggcccatccccagtgccttgacccaagcgatccggaactttgccaagagcctggagagc
tggctcacccacgccatggtcaacatccccgaggagatgctgcgggtgaaggtggccgcg
gctggcgccttcgcgcagacactgcggcgctacacgtcgctcaaccacctggcgcaggcg
gcgcgcgctgtgctgcagaacaccgcacagatcaaccagatgctgagcgacctcaaccgc
gtggacttcgccaacgtgcaggagcaggcctcgtgggtgtgccgctgcgaggaccgcgtg
gtgcagcggctggagcaggacttcaaggtgacgctgcagcagcagaactcgctggagcag
tgggcggcctggctggacggcgtggtgagccaggtgctcaagccctaccagggcagcgcc
ggcttccccaaggccgccaagctcttcctcctcaagtggtccttctacagctccatggtg
atccgggacctgaccctgcgcagcgccgccagcttcggttccttccacctcatccggctg
ctctacgacgagtacatgtactacctgatcgagcaccgcgtagcccaggccaagggcgag
acccccatcgccgtcatgggcgagttcgccaatctggccacctccctgaaccccctggac
cccgacaaagacgaggaggaagaagaggaggaggagagcgaggacgagctgccgcaggac
atctcactggcggctggcggcgagtcacccgcgctgggcccggagaccctggagccgccg
gccaagctggcgcggactgacgcgcgcggcctcttcgtgcaggcgctgccctccagctaa

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Ontology (2)   
   KEGG BRITE (2)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
   PHAROS (1)   
   PRONIT (1)   
Protein sequence (27)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (25)   
DNA sequence (39)   
   RefSeq(nuc) (25)   
   GenBank (7)   
   EMBL (7)   
3D Structure (1)   
   PDB (1)   
Protein domain (2)   
   Pfam (2)   
All databases (92)   

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