KEGG   Homo sapiens (human): 60678
Entry
60678             CDS       T01001                                 
Symbol
EEFSEC, EFSEC, SELB
Name
(RefSeq) eukaryotic elongation factor, selenocysteine-tRNA specific
  KO
K03833  selenocysteine-specific elongation factor
Organism
hsa  Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:hsa03012]
    60678 (EEFSEC)
Translation factors [BR:hsa03012]
 Eukaryotic type
  Elongation factors
   60678 (EEFSEC)
 Prokaryotic type
   60678 (EEFSEC)
SSDB
Motif
Pfam: eEFSec_4th euk_SelB_III GTP_EFTU GTP_EFTU_D2 MMR_HSR1 cobW Gtr1_RagA RIBIOP_C FliS_cochap RsgA_GTPase
Other DBs
NCBI-GeneID: 60678
NCBI-ProteinID: NP_068756
OMIM: 607695
HGNC: 24614
Ensembl: ENSG00000132394
UniProt: P57772
Structure
Position
3:128153481..128426223
AA seq 596 aa
MAGRRVNVNVGVLGHIDSGKTALARALSTTASTAAFDKQPQSRERGITLDLGFSCFSVPL
PARLRSSLPEFQAAPEAEPEPGEPLLQVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVT
KGMQTQSAECLVIGQIACQKLVVVLNKIDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAP
IIPVAAKPGGPEAPETEAPQGIPELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTV
MTGTILSGSISLGDSVEIPALKVVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLER
GLVCAPESLHTVHAALISVEKIPYFRGPLQTKAKFHITVGHETVMGRLMFFSPAPDNFDQ
EPILDSFNFSQEYLFQEQYLSKDLTPAVTDNDEADKKAGQATEGHCPRQQWALVEFEKPV
TCPRLCLVIGSRLDADIHTNTCRLAFHGILLHGLEDRNYADSFLPRLKVYKLKHKHGLVE
RAMDDYSVIGRSLFKKETNIQLFVGLKVHLSTGELGIIDSAFGQSGKFKIHIPGGLSPES
KKILTPALKKRARAGRGEATRQEESAERSEPSQHVVLSLTFKRYVFDTHKRMVQSP
NT seq 1791 nt   +upstreamnt  +downstreamnt
atggcagggcggcgggtgaacgtgaacgtgggcgtgctgggccacatcgacagcggcaag
acggcgctggcgcgggcgctaagcaccacagcctccaccgccgcctttgacaagcagccg
cagagccgcgagcgcggcatcacgctcgatctgggcttctcgtgcttctcggtgccgctg
cccgcgcgcctgcggtcgtctttgcccgagttccaggcagcgcccgaggccgagcccgag
cccggcgagccactgcttcaggtcacgctggtcgactgccccgggcacgcctccctcatc
cggaccatcatcggcggggcccagatcattgatctgatgatgctggtcatcgatgtgacc
aaggggatgcagacccagtcagcggaatgccttgtgatcggccagattgcctgccagaag
ctggtcgtggtgctgaacaaaatagacctcttacctgaaggaaagagacaggcagcaatt
gataaaatgaccaagaaaatgcagaagaccctagagaacaccaagttccgaggtgcaccg
attatacccgtggcggccaagccggggggaccagaggcccccgaaactgaagctccacag
ggcattccagagctcattgagctcctgacgtcccagatttccatcccaacgagagatccc
tcgggaccgttcctcatgtctgtggaccactgtttctccatcaaaggccaaggcactgtg
atgacagggaccatcctttcaggctccatcagcctcggtgacagtgtggagatccctgcc
ctcaaggtggtgaagaaggtgaagtccatgcagatgttccacatgcccatcacttcagcc
atgcaaggagaccggctgggcatctgcgtcacccagtttgaccctaagctgctggagcgc
gggttggtgtgtgcccccgagtccctgcacactgtccatgcggccctcatctctgtggaa
aagataccgtatttccgggggcccctgcaaaccaaggccaagttccacattacagtgggc
catgaaacagtcatgggccggttgatgttcttcagtcctgctccagataactttgaccag
gagcctatactggactctttcaacttctctcaagaataccttttccaggagcagtacctg
tccaaggatttgacaccagcagtgacagacaatgatgaggccgacaagaaggccggccag
gccacagagggccattgtcctcggcagcagtgggccctggtggagtttgagaagcccgtc
acctgccctcggctgtgcctggtgattggctccaggctagatgcggacattcacaccaac
acgtgccggctagccttccatggcatcctgctccacgggctagaggacaggaactacgcc
gacagcttcctgcccaggctgaaggtgtacaagctgaagcacaagcatggccttgtggag
cgggcgatggatgactacagtgtgatcggccgctccctgttcaaaaaggaaaccaacatc
cagctcttcgtggggctcaaggtgcacttgtccactggggaactgggcatcatcgacagt
gccttcggccagagcggcaagttcaagatccacatcccaggtggcctcagccccgagtcc
aagaagatcctgacacccgccctcaagaagcgggcccgggctggccgtggggaggccacc
aggcaggaggagagcgccgagcggagcgagccctcacagcatgtggtgctcagcctgact
ttcaagcgttatgtcttcgacacccacaagcgcatggttcagtctccctga

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Ontology (2)   
   KEGG BRITE (2)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (36)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (34)   
DNA sequence (42)   
   RefSeq(nuc) (34)   
   GenBank (4)   
   EMBL (4)   
3D Structure (4)   
   PDB (4)   
Protein domain (10)   
   Pfam (10)   
All databases (107)   

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