KEGG   Homo sapiens (human): 6097Help
Entry
6097              CDS       T01001                                 

Gene name
RORC, IMD42, NR1F3, RORG, RZR-GAMMA, RZRG, TOR
Definition
(RefSeq) RAR related orphan receptor C
  KO
K08534  RAR-related orphan receptor gamma
Organism
hsa  Homo sapiens (human)
Pathway
hsa04659  Th17 cell differentiation
hsa04710  Circadian rhythm
hsa05321  Inflammatory bowel disease (IBD)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 Organismal Systems
  Immune system
   04659 Th17 cell differentiation
    6097 (RORC)
  Environmental adaptation
   04710 Circadian rhythm
    6097 (RORC)
 Human Diseases
  Immune diseases
   05321 Inflammatiory bowel disease (IBD)
    6097 (RORC)
Transcription factors [BR:hsa03000]
 Eukaryotic Type
  Zinc finger
   Cys4 thyroid hormone-like
    6097 (RORC)
Nuclear receptors [BR:hsa03310]
 1. Thyroid hormone like
  1F. RAR-related orphan receptor
   6097 (RORC)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: zf-C4 Hormone_recep
Motif
Other DBs
NCBI-GeneID: 6097
NCBI-ProteinID: NP_005051
OMIM: 602943
HGNC: 10260
Ensembl: ENSG00000143365
Vega: OTTHUMG00000013053
Pharos: P51449(Tchem)
UniProt: P51449 Q6I9R9
Structure
PDB: 

Position
1q21.3
AA seq 518 aa AA seqDB search
MDRAPQRQHRASRELLAAKKTHTSQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQR
CNAAYSCTRQQNCPIDRTSRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQK
QLQQRQQQQQEPVVKTPPAGAQGADTLTYTLGLPDGQLPLGSSPDLPEASACPPGLLKAS
GSGPSYSNNLAKAGLNGASCHLEYSPERGKAEGRESFYSTGSQLTPDRCGLRFEEHRHPG
LGELGQGPDSYGSPSFRSTPEAPYASLTEIEHLVQSVCKSYRETCQLRLEDLLRQRSNIF
SREEVTGYQRKSMWEMWERCAHHLTEAIQYVVEFAKRLSGFMELCQNDQIVLLKAGAMEV
VLVRMCRAYNADNRTVFFEGKYGGMELFRALGCSELISSIFDFSHSLSALHFSEDEIALY
TALVLINAHRPGLQEKRKVEQLQYNLELAFHHHLCKTHRQSILAKLPPKGKLRSLCSQHV
ERLQIFQHLHPIVVQAAFPPLYKELFSTETESPVGLSK
NT seq 1557 nt NT seq  +upstreamnt  +downstreamnt
atggacagggccccacagagacagcaccgagcctcacgggagctgctggctgcaaagaag
acccacacctcacaaattgaagtgatcccttgcaaaatctgtggggacaagtcgtctggg
atccactacggggttatcacctgtgaggggtgcaagggcttcttccgccggagccagcgc
tgtaacgcggcctactcctgcacccgtcagcagaactgccccatcgaccgcaccagccga
aaccgatgccagcactgccgcctgcagaaatgcctggcgctgggcatgtcccgagatgct
gtcaagttcggccgcatgtccaagaagcagagggacagcctgcatgcagaagtgcagaaa
cagctgcagcagcggcaacagcagcaacaggaaccagtggtcaagacccctccagcaggg
gcccaaggagcagataccctcacctacaccttggggctcccagacgggcagctgcccctg
ggctcctcgcctgacctgcctgaggcttctgcctgtccccctggcctcctgaaagcctca
ggctctgggccctcatattccaacaacttggccaaggcagggctcaatggggcctcatgc
caccttgaatacagccctgagcggggcaaggctgagggcagagagagcttctatagcaca
ggcagccagctgacccctgaccgatgtggacttcgttttgaggaacacaggcatcctggg
cttggggaactgggacagggcccagacagctacggcagccccagtttccgcagcacaccg
gaggcaccctatgcctccctgacagagatagagcacctggtgcagagcgtctgcaagtcc
tacagggagacatgccagctgcggctggaggacctgctgcggcagcgctccaacatcttc
tcccgggaggaagtgactggctaccagaggaagtccatgtgggagatgtgggaacggtgt
gcccaccacctcaccgaggccattcagtacgtggtggagttcgccaagaggctctcaggc
tttatggagctctgccagaatgaccagattgtgcttctcaaagcaggagcaatggaagtg
gtgctggttaggatgtgccgggcctacaatgctgacaaccgcacggtcttttttgaaggc
aaatacggtggcatggagctgttccgagccttgggctgcagcgagctcatcagctccatc
tttgacttctcccactccctaagtgccttgcacttttccgaggatgagattgccctctac
acagcccttgttctcatcaatgcccatcggccagggctccaagagaaaaggaaagtagaa
cagctgcagtacaatctggagctggcctttcatcatcatctctgcaagactcatcgccaa
agcatcctggcaaagctgccacccaaggggaagcttcggagcctgtgtagccagcatgtg
gaaaggctgcagatcttccagcacctccaccccatcgtggtccaagccgctttccctcca
ctctacaaggagctcttcagcactgaaaccgagtcacctgtggggctgtccaagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Disease (2)   
   OMIM (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   UniGene (2)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   PHAROS (1)   
   VEGA (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (37)   
   RefSeq(nuc) (3)   
   GenBank (17)   
   EMBL (17)   
Protein domain (2)   
   Pfam (2)   
All databases (79)   

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