KEGG   Homo sapiens (human): 639
Entry
639               CDS       T01001                                 
Symbol
PRDM1, BLIMP1, PRDI-BF1
Name
(RefSeq) PR/SET domain 1
  KO
K24501  PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
hsa  Homo sapiens (human)
Disease
H02434  Diffuse large B-cell lymphoma, not otherwise specified
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hsa03000]
    639 (PRDM1)
Enzymes [BR:hsa01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.-
     639 (PRDM1)
Transcription factors [BR:hsa03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 PRDM
    639 (PRDM1)
SSDB
Motif
Pfam: zf-H2C2_2 zf-C2H2 SET zf-C2H2_4 zf-C2H2_6 zf-C2H2_jaz zf-C2HE zf-met
Other DBs
NCBI-GeneID: 639
NCBI-ProteinID: NP_001189
OMIM: 603423
HGNC: 9346
Ensembl: ENSG00000057657
Pharos: O75626(Tbio)
UniProt: O75626
Structure
Position
6:105992690..106109938
AA seq 825 aa
MLDICLEKRVGTTLAAPKCNSSTVRFQGLAEGTKGTMKMDMEDADMTLWTEAEFEEKCTY
IVNDHPWDSGADGGTSVQAEASLPRNLLFKYATNSEEVIGVMSKEYIPKGTRFGPLIGEI
YTNDTVPKNANRKYFWRIYSRGELHHFIDGFNEEKSNWMRYVNPAHSPREQNLAACQNGM
NIYFYTIKPIPANQELLVWYCRDFAERLHYPYPGELTMMNLTQTQSSLKQPSTEKNELCP
KNVPKREYSVKEILKLDSNPSKGKDLYRSNISPLTSEKDLDDFRRRGSPEMPFYPRVVYP
IRAPLPEDFLKASLAYGIERPTYITRSPIPSSTTPSPSARSSPDQSLKSSSPHSSPGNTV
SPVGPGSQEHRDSYAYLNASYGTEGLGSYPGYAPLPHLPPAFIPSYNAHYPKFLLPPYGM
NCNGLSAVSSMNGINNFGLFPRLCPVYSNLLGGGSLPHPMLNPTSLPSSLPSDGARRLLQ
PEHPREVLVPAPHSAFSFTGAAASMKDKACSPTSGSPTAGTAATAEHVVQPKATSAAMAA
PSSDEAMNLIKNKRNMTGYKTLPYPLKKQNGKIKYECNVCAKTFGQLSNLKVHLRVHSGE
RPFKCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQ
CKVCPAKFTQFVHLKLHKRLHTRERPHKCSQCHKNYIHLCSLKVHLKGNCAAAPAPGLPL
EDLTRINEEIEKFDISDNADRLEDVEDDISVISVVEKEILAVVRKEKEETGLKVSLQRNM
GNGLLSSGCSLYESSDLPLMKLPPSNPLPLVPVKVKQETVEPMDP
NT seq 2478 nt   +upstreamnt  +downstreamnt
atgttggatatttgcttggaaaaacgtgtgggtacgaccttggctgcccccaagtgtaac
tccagcactgtgaggtttcagggattggcagaggggaccaaggggaccatgaaaatggac
atggaggatgcggatatgactctgtggacagaggctgagtttgaagagaagtgtacatac
attgtgaacgaccacccctgggattctggtgctgatggcggtacttcggttcaggcggag
gcatccttaccaaggaatctgcttttcaagtatgccaccaacagtgaagaggttattgga
gtgatgagtaaagaatacataccaaagggcacacgttttggacccctaataggtgaaatc
tacaccaatgacacagttcctaagaacgccaacaggaaatatttttggaggatctattcc
agaggggagcttcaccacttcattgacggctttaatgaagagaaaagcaactggatgcgc
tatgtgaatccagcacactctccccgggagcaaaacctggctgcgtgtcagaacgggatg
aacatctacttctacaccattaagcccatccctgccaaccaggaacttcttgtgtggtat
tgtcgggactttgcagaaaggcttcactacccttatcccggagagctgacaatgatgaat
ctcacacaaacacagagcagtctaaagcaaccgagcactgagaaaaatgaactctgccca
aagaatgtcccaaagagagagtacagcgtgaaagaaatcctaaaattggactccaacccc
tccaaaggaaaggacctctaccgttctaacatttcacccctcacatcagaaaaggacctc
gatgactttagaagacgtgggagccccgaaatgcccttctaccctcgggtcgtttacccc
atccgggcccctctgccagaagactttttgaaagcttccctggcctacgggatcgagaga
cccacgtacatcactcgctcccccattccatcctccaccactccaagcccctctgcaaga
agcagccccgaccaaagcctcaagagctccagccctcacagcagccctgggaatacggtg
tcccctgtgggccccggctctcaagagcaccgggactcctacgcttacttgaacgcgtcc
tacggcacggaaggtttgggctcctaccctggctacgcacccctgccccacctcccgcca
gctttcatcccctcgtacaacgctcactaccccaagttcctcttgcccccctacggcatg
aattgtaatggcctgagcgctgtgagcagcatgaatggcatcaacaactttggcctcttc
ccgaggctgtgccctgtctacagcaatctcctcggtgggggcagcctgccccaccccatg
ctcaaccccacttctctcccgagctcgctgccctcagatggagcccggaggttgctccag
ccggagcatcccagggaggtgcttgtcccggcgccccacagtgccttctcctttaccggg
gccgccgccagcatgaaggacaaggcctgtagccccacaagcgggtctcccacggcggga
acagccgccacggcagaacatgtggtgcagcccaaagctacctcagcagcgatggcagcc
cccagcagcgacgaagccatgaatctcattaaaaacaaaagaaacatgaccggctacaag
acccttccctacccgctgaagaagcagaacggcaagatcaagtacgaatgcaacgtttgc
gccaagactttcggccagctctccaatctgaaggtccacctgagagtgcacagtggagaa
cggcctttcaaatgtcagacttgcaacaagggctttactcagctcgcccacctgcagaaa
cactacctggtacacacgggagaaaagccacatgaatgccaggtctgccacaagagattt
agcagcaccagcaatctcaagacccacctgcgactccattctggagagaaaccataccaa
tgcaaggtgtgccctgccaagttcacccagtttgtgcacctgaaactgcacaagcgtctg
cacacccgggagcggccccacaagtgctcccagtgccacaagaactacatccatctctgt
agcctcaaggttcacctgaaagggaactgcgctgcggccccggcgcctgggctgcccttg
gaagatctgacccgaatcaatgaagaaatcgagaagtttgacatcagtgacaatgctgac
cggctcgaggacgtggaggatgacatcagtgtgatctctgtagtggagaaggaaattctg
gccgtggtcagaaaagagaaagaagaaactggcctgaaagtgtctttgcaaagaaacatg
gggaatggactcctctcctcagggtgcagcctttatgagtcatcagatctacccctcatg
aagttgcctcccagcaacccactacctctggtacctgtaaaggtcaaacaagaaacagtt
gaaccaatggatccttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Disease (2)   
   KEGG DISEASE (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   OC (1)   
   PHAROS (1)   
Protein sequence (18)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (16)   
DNA sequence (40)   
   RefSeq(nuc) (16)   
   GenBank (12)   
   EMBL (12)   
3D Structure (1)   
   PDB (1)   
Protein domain (8)   
   Pfam (8)   
All databases (91)   

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