KEGG   Homo sapiens (human): 6399Help
Entry
6399              CDS       T01001                                 

Gene name
TRAPPC2, MIP2A, SEDL, SEDT, TRAPPC2P1, TRS20, ZNF547L, hYP38334
Definition
(RefSeq) trafficking protein particle complex 2
  KO
K20301  trafficking protein particle complex subunit 2
Organism
hsa  Homo sapiens (human)
Disease
H00760  Spondyloepiphyseal dysplasia tarda
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hsa04131]
    6399 (TRAPPC2)
Membrane trafficking [BR:hsa04131]
 Endosome - Golgi transport
  Tethering complex
   TRAPP complex II
    6399 (TRAPPC2)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   TRAPP complex I
    6399 (TRAPPC2)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Sedlin_N Sybindin DUF4984
Motif
Other DBs
NCBI-GeneID: 6399
NCBI-ProteinID: NP_001011658
OMIM: 300202
HGNC: 23068
Ensembl: ENSG00000196459
Vega: OTTHUMG00000021157
Pharos: P0DI82(Tbio) P0DI81(Tbio)
UniProt: P0DI81 P0DI82 Q6IBE5
Position
Xp22.2
AA seq 140 aa AA seqDB search
MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY
LKTVDKFNEWFVSAFVTAGHMRFIMLHDIRQEDGIKNFFTDVYDLYIKFSMNPFYEPNSP
IRSSAFDRKVQFLGKKHLLS
NT seq 423 nt NT seq  +upstreamnt  +downstreamnt
atgtctgggagcttctactttgtaattgttggccaccatgataatccagtttttgaaatg
gagtttttgccagctgggaaggcagaatccaaagacgaccatcgtcatctgaaccagttc
atagctcatgctgctctcgacctcgtagatgagaacatgtggctatcgaacaacatgtac
ttgaaaactgtggacaagttcaacgagtggtttgtgtcggcatttgtcactgcggggcat
atgaggtttattatgcttcatgacataagacaagaagatggaataaagaacttctttact
gatgtttatgatttatatataaagttttcaatgaatccattttatgaacccaattctcct
attcgatcaagtgcatttgacagaaaagttcagtttcttgggaagaaacaccttttaagc
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Disease (3)   
   KEGG DISEASE (1)   
   OMIM (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (4)   
   OC (1)   
   PHAROS (2)   
   VEGA (1)   
Protein sequence (10)   
   UniProt (3)   
   SWISS-PROT (2)   
   RefSeq(pep) (5)   
DNA sequence (43)   
   RefSeq(nuc) (5)   
   GenBank (19)   
   EMBL (19)   
Protein domain (3)   
   Pfam (3)   
All databases (78)   

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