KEGG   Homo sapiens (human): 6539
Entry
6539              CDS       T01001                                 
Symbol
SLC6A12, BGT-1, BGT1, GAT2
Name
(RefSeq) solute carrier family 6 member 12
  KO
K05045  solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
hsa  Homo sapiens (human)
Pathway
hsa04082  Neuroactive ligand signaling
hsa04721  Synaptic vesicle cycle
hsa04727  GABAergic synapse
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04082 Neuroactive ligand signaling
    6539 (SLC6A12)
 09150 Organismal Systems
  09156 Nervous system
   04727 GABAergic synapse
    6539 (SLC6A12)
   04721 Synaptic vesicle cycle
    6539 (SLC6A12)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:hsa02000]
    6539 (SLC6A12)
Transporters [BR:hsa02000]
 Solute carrier family (SLC)
  SLC6: Sodium- and chloride-dependent neurotransmitter transporter
   6539 (SLC6A12)
SSDB
Motif
Pfam: SNF
Other DBs
NCBI-GeneID: 6539
NCBI-ProteinID: NP_001116319
OMIM: 603080
HGNC: 11045
Ensembl: ENSG00000111181
UniProt: P48065
Position
12:complement(183848..214157)
AA seq 614 aa
MDGKVAVQECGPPAVSWVPEEGEKLDQEDEDQVKDRGQWTNKMEFVLSVAGEIIGLGNVW
RFPYLCYKNGGGAFFIPYFIFFFVCGIPVFFLEVALGQYTSQGSVTAWRKICPLFQGIGL
ASVVIESYLNVYYIIILAWALFYLFSSFTSELPWTTCNNFWNTEHCTDFLNHSGAGTVTP
FENFTSPVMEFWERRVLGITSGIHDLGSLRWELALCLLLAWVICYFCIWKGVKSTGKVVY
FTATFPYLMLVILLIRGVTLPGAYQGIIYYLKPDLFRLKDPQVWMDAGTQIFFSFAICQG
CLTALGSYNKYHNNCYKDCIALCFLNSATSFVAGFVVFSILGFMSQEQGVPISEVAESGP
GLAFIAFPKAVTMMPLSQLWSCLFFIMLIFLGLDSQFVCVECLVTASIDMFPRQLRKSGR
RELLILTIAVMCYLIGLFLVTEGGMYIFQLFDYYASSGICLLFLSLFEVVCISWVYGADR
FYDNIEDMIGYRPWPLVKISWLFLTPGLCLATFLFSLSKYTPLKYNNVYVYPPWGYSIGW
FLALSSMVCVPLFVVITLLKTRGPFRKRLRQLITPDSSLPQPKQHPCLDGSAGRNFGPSP
TREGLIAGEKETHL
NT seq 1845 nt   +upstreamnt  +downstreamnt
atggacgggaaggtggcagtgcaagagtgtgggcctcctgcagtctcctgggtccccgag
gagggagagaagttggaccaggaagacgaggaccaggtgaaggatcggggccaatggacc
aacaagatggagtttgtgctgtcagtggccggggagatcattgggctgggcaatgtctgg
aggtttccctatctctgctacaaaaacggaggtggagccttcttcatcccctacttcatc
ttcttctttgtctgcggcatcccggtgttcttcctggaggtggcgttgggccaatacacc
agccaagggagtgtcacagcctggaggaagatctgccccctcttccagggcattggtctg
gcatctgtggtcatcgagtcatatttgaatgtctactacatcatcatccttgcctgggct
ctcttctacctgttcagctccttcacttctgagctgccctggacgacctgcaacaacttt
tggaacacagagcattgcacggactttctgaaccactcaggagccggcacagtgacccca
tttgagaattttacctcacctgtcatggaattctgggagagacgagttctgggcatcacc
tcgggcatccatgacctgggctccctgcgctgggagctggccctgtgcctcctgctcgcc
tgggtcatctgctatttctgcatctggaagggggtcaagtccacaggcaaggtggtttat
ttcacagccacgtttccgtacctgatgcttgtcattttgctgatcagaggtgtcaccctt
cccggagcctaccagggcatcatctactacttgaagccagatttgttccgcctcaaggac
cctcaggtgtggatggatgcgggcacccagatcttcttctcctttgccatctgccagggg
tgcctgacagccctgggcagctacaacaagtatcacaacaactgctacaaggactgcatc
gccctctgcttcctgaacagtgccaccagctttgtggctgggtttgttgtcttctccatc
ctgggcttcatgtcccaagagcaaggggtgcccatttctgaagtggccgagtcaggtcct
gggctggccttcatcgccttccccaaggctgtgactatgatgcccttatcccagctgtgg
tcctgcctgttctttatcatgctcatattcctagggctggacagccagtttgtctgtgtg
gagtgcctggtgacagcctccatagacatgttccccaggcagctccggaagagcgggcgg
cgcgagctcctcatcctcaccatcgccgtcatgtgctacctgatagggcttttcctggtc
accgagggcgggatgtacatcttccagctgtttgactactatgcttccagtggcatatgc
ctgctgttcctgtcattgtttgaagtggtctgcataagctgggtgtatggggcggaccgt
ttctatgacaacattgaggacatgattggctaccggccatggcccctggtgaagatctcc
tggctcttcctgacccctggactttgcctggccactttcctcttctccttgagcaagtac
acccccctcaagtacaacaacgtctatgtgtacccgccctggggatactccattggctgg
ttcctggctctgtcctccatggtctgtgtcccactcttcgtcgtcatcaccctcctgaag
actcggggtcctttcaggaagcgtctgcgtcagctcatcacccctgactccagtctgcca
cagcccaagcaacatccctgcttggatggcagtgctggccggaactttgggccctcccca
acaagggaaggactgatagccggggagaaggagacccatttgtag

  All links  
Disease (1)   
   OMIM (1)   
Gene (12)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (22)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (20)   
DNA sequence (52)   
   RefSeq(nuc) (20)   
   GenBank (16)   
   EMBL (16)   
Protein domain (1)   
   Pfam (1)   
All databases (88)   

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