KEGG   Homo sapiens (human): 6540
Entry
6540              CDS       T01001                                 
Symbol
SLC6A13, GAT-2, GAT2, GAT3
Name
(RefSeq) solute carrier family 6 member 13
  KO
K05046  solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
hsa  Homo sapiens (human)
Pathway
hsa04721  Synaptic vesicle cycle
hsa04727  GABAergic synapse
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09150 Organismal Systems
  09156 Nervous system
   04727 GABAergic synapse
    6540 (SLC6A13)
   04721 Synaptic vesicle cycle
    6540 (SLC6A13)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:hsa02000]
    6540 (SLC6A13)
Transporters [BR:hsa02000]
 Solute carrier family (SLC)
  SLC6: Sodium- and chloride-dependent neurotransmitter transporter
   6540 (SLC6A13)
SSDB
Motif
Pfam: SNF
Other DBs
NCBI-GeneID: 6540
NCBI-ProteinID: NP_057699
OMIM: 615097
HGNC: 11046
Ensembl: ENSG00000010379
Pharos: Q9NSD5(Tbio)
UniProt: Q9NSD5
Position
12:complement(220622..262836)
AA seq 602 aa
MDSRVSGTTSNGETKPVYPVMEKKEEDGTLERGHWNNKMEFVLSVAGEIIGLGNVWRFPY
LCYKNGGGAFFIPYLVFLFTCGIPVFLLETALGQYTSQGGVTAWRKICPIFEGIGYASQM
IVILLNVYYIIVLAWALFYLFSSFTIDLPWGGCYHEWNTEHCMEFQKTNGSLNGTSENAT
SPVIEFWERRVLKISDGIQHLGALRWELALCLLLAWVICYFCIWKGVKSTGKVVYFTATF
PYLMLVVLLIRGVTLPGAAQGIQFYLYPNLTRLWDPQVWMDAGTQIFFSFAICLGCLTAL
GSYNKYHNNCYRDCIALCFLNSGTSFVAGFAIFSILGFMSQEQGVPISEVAESGPGLAFI
AYPRAVVMLPFSPLWACCFFFMVVLLGLDSQFVCVESLVTALVDMYPHVFRKKNRREVLI
LGVSVVSFLVGLIMLTEGGMYVFQLFDYYAASGMCLLFVAIFESLCVAWVYGAKRFYDNI
EDMIGYRPWPLIKYCWLFLTPAVCTATFLFSLIKYTPLTYNKKYTYPWWGDALGWLLALS
SMVCIPAWSLYRLGTLKGPFRERIRQLMCPAEDLPQRNPAGPSAPATPRTSLLRLTELES
HC
NT seq 1809 nt   +upstreamnt  +downstreamnt
atggatagcagggtctcaggcacaaccagtaatggagagacaaaaccagtgtatccagtc
atggaaaagaaggaggaagatggcaccctggagcgggggcactggaacaacaagatggag
tttgtgctgtcagtggctggggagatcattggcttaggcaacgtctggaggtttccctat
ctctgctacaaaaatgggggaggtgccttcttcatcccctacctcgtcttcctctttacc
tgtggcattcctgtcttccttctggagacagcactaggccagtacactagccagggaggc
gtcacagcctggaggaagatctgccccatctttgagggcattggctatgcctcccagatg
atcgtcatcctcctcaacgtctactacatcattgtgttggcctgggccctgttctacctc
ttcagcagcttcaccatcgacctgccctggggcggctgctaccatgagtggaacacagaa
cactgtatggagttccagaagaccaacggctccctgaatggtacctctgagaatgccacc
tctcctgtcatcgagttctgggagcggcgggtcttgaagatctctgatgggatccagcac
ctgggggccctgcgctgggagctggctctgtgcctcctgctggcctgggtcatctgctac
ttctgcatctggaagggggtgaagtccacaggcaaggtggtgtacttcacggccacattt
ccttacctcatgctggtggtcctgttaattcgaggggtgacgttgcctggggcagcccaa
ggaattcagttttacctgtacccaaacctcacgcgtctgtgggatccccaggtgtggatg
gatgcaggcacccagatattcttctccttcgccatctgtcttgggtgcctgacagccctg
ggcagctacaacaagtaccacaacaactgctacagggactgcatcgccctctgcttcctc
aacagcggcaccagctttgtggccggctttgccatcttctccatcctgggcttcatgtct
caggagcagggggtgcccatttctgaggtggccgagtcaggccctggcctggctttcatc
gcttacccgcgggctgtggtgatgctgcccttctctcctctctgggcctgctgtttcttc
ttcatggtcgttctcctgggactggatagccagtttgtgtgtgtagaaagcctggtgaca
gcgctggtggacatgtaccctcacgtgttccgcaagaagaaccggagggaagtcctcatc
cttggagtatctgtcgtctccttccttgtggggctgatcatgctcacagagggcggaatg
tacgtgttccagctctttgactactatgcggccagtggcatgtgcctcctgttcgtggcc
atcttcgagtccctctgtgtggcttgggtttacggagccaagcgcttctacgacaacatc
gaagacatgattgggtacaggccatggcctcttatcaaatactgttggctcttcctcaca
ccagctgtgtgcacagccacctttctcttctccctgataaagtacactccgctgacctac
aacaagaagtacacgtacccgtggtggggcgatgccctgggctggctcctggctctgtcc
tccatggtctgcattcctgcctggagcctctacagactcggaaccctcaagggccccttc
agagagagaatccgtcagctcatgtgcccagccgaggacctgccccagcggaacccagca
ggaccctcggctcccgccacccccaggacctcactgctcagactcacagagctagagtct
cactgctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
   PHAROS (1)   
Protein sequence (13)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (11)   
DNA sequence (37)   
   RefSeq(nuc) (11)   
   GenBank (13)   
   EMBL (13)   
Protein domain (1)   
   Pfam (1)   
All databases (71)   

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