KEGG   Homo sapiens (human): 6596
Entry
6596              CDS       T01001                                 
Symbol
HLTF, HIP116, HIP116A, HLTF1, RNF80, SMARCA3, SNF2L3, ZBU1
Name
(RefSeq) helicase like transcription factor
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
hsa  Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hsa04121]
    6596 (HLTF)
   03400 DNA repair and recombination proteins [BR:hsa03400]
    6596 (HLTF)
Enzymes [BR:hsa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     6596 (HLTF)
Ubiquitin system [BR:hsa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    6596 (HLTF)
DNA repair and recombination proteins [BR:hsa03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    6596 (HLTF)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX DEAD zf-RING_2 zf-RING_5 ResIII zf-ANAPC11 zf-C3HC4_4 zf-Nse HDA2-3 Prok-RING_4 zf-rbx1 zf-RING_6
Other DBs
NCBI-GeneID: 6596
NCBI-ProteinID: NP_001305864
OMIM: 603257
HGNC: 11099
Ensembl: ENSG00000071794
UniProt: Q14527 A8K5B6
Structure
Position
3:complement(149030063..149086533)
AA seq 1009 aa
MSWMFKRDPVWKYLQTVQYGVHGNFPRLSYPTFFPRFEFQDVIPPDDFLTSDEEVDSVLF
GSLRGHVVGLRYYTGVVNNNEMVALQRDPNNPYDKNAIKVNNVNGNQVGHLKKELAGALA
YIMDNKLAQIEGVVPFGANNAFTMPLHMTFWGKEENRKAVSDQLKKHGFKLGPAPKTLGF
NLESGWGSGRAGPSYSMPVHAAVQMTTEQLKTEFDKLFEDLKEDDKTHEMEPAEAIETPL
LPHQKQALAWMVSRENSKELPPFWEQRNDLYYNTITNFSEKDRPENVHGGILADDMGLGK
TLTAIAVILTNFHDGRPLPIERVKKNLLKKEYNVNDDSMKLGGNNTSEKADGLSKDASRC
SEQPSISDIKEKSKFRMSELSSSRPKRRKTAVQYIESSDSEEIETSELPQKMKGKLKNVQ
SETKGRAKAGSSKVIEDVAFACALTSSVPTTKKKMLKKGACAVEGSKKTDVEERPRTTLI
ICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIREPALLSKQDIVLTTYNILTHDYGT
KGDSPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLESERRWVLTGTPIQNSLKDLWSLL
SFLKLKPFIDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTSKIKGKPVLELPE
RKVFIQHITLSDEERKIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTY
LLTNAVSSNGPSGNDTPEELRKKLIRKMKLILSSGSDEECAICLDSLTVPVITHCAHVFC
KPCICQVIQNEQPHAKCPLCRNDIHEDNLLECPPEELARDSEKKSDMEWTSSSKINALMH
ALTDLRKKNPNIKSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQCFQNT
EAGSPTIMLLSLKAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKF
IVKDSVEENMLKIQNKKRELAAGAFGTKKPNADEMKQAKINEIRTLIDL
NT seq 3030 nt   +upstreamnt  +downstreamnt
atgtcctggatgttcaagagggatccagtttggaagtacttgcagactgtccagtatgga
gttcatggaaattttccacgcctctcatatccaactttctttccacgttttgaattccaa
gatgttatccctccagatgactttctaactagtgatgaagaagtagattccgttttattt
ggaagtttgagaggtcatgtggttggactacgctattacacgggagtagttaataataat
gaaatggttgcattacaacgagatcctaataacccttatgataagaatgcaattaaagta
aacaatgtgaatggaaatcaagttggccatttaaagaaagagcttgcaggtgctttggcc
tatatcatggacaacaaattggcacaaattgaaggggtagttccttttggtgcaaacaat
gcttttaccatgcctctgcatatgactttttggggaaaagaagaaaatagaaaagcggtt
tcagatcagttgaagaaacatggatttaaattgggtcctgcaccaaaaactttaggattc
aatttggaaagtggttggggctctggaagagctggaccaagctatagtatgccagtgcat
gctgcagtacagatgacaactgaacagcttaaaacagaatttgacaaattgtttgaagat
ttaaaagaagatgataaaacccatgaaatggaaccagctgaggctattgaaacaccactg
cttccacatcaaaaacaagctctagcttggatggtgtcacgggaaaatagcaaagaactt
ccaccattctgggaacagcgaaatgacttatactataacacaataacaaatttttctgag
aaggaccgaccagaaaatgtccatggaggaattttagctgatgatatgggtttgggtaaa
actcttacggccattgcagtaatccttaccaacttccatgatggcagacctcttcctatt
gaaagagttaaaaagaatctactgaagaaggaatataatgttaacgatgactctatgaaa
cttggaggaaacaataccagtgaaaaggcagatggactaagcaaagacgcatctagatgt
agtgaacaacccagtatttcagatatcaaggagaagagtaagtttcgcatgtcagaattg
tctagctcccgccccaaaagaagaaaaactgctgtccagtacatagaaagcagtgattca
gaggaaattgaaacaagtgaattgccgcagaaaatgaaaggcaaactgaaaaatgtacag
tctgaaactaaaggcagggcgaaagcaggatcttctaaggttatagaagatgtggcattt
gcatgtgcattaacttcatctgttcctacaacaaaaaagaaaatgttgaaaaagggagct
tgtgcagtggaggggtcaaagaaaactgatgttgaggagagaccaagaacaacactgatc
atctgtccgctttctgtgttaagcaactggattgaccagtttggacaacatataaaatca
gatgtacacttgaatttttatgtttattatggtcctgatcgtattagagaaccggcctta
ctttcaaaacaggatattgttttgactacgtataatattttaactcatgactatggaact
aaaggagatagtccattacatagcataaggtggctaagagtgatcctggatgaaggacat
gccatacgaaatccaaatgctcagcagacaaaagctgtacttgacttagaatcagaaaga
agatgggttttgacaggtactccaatccagaattctttaaaggacttgtggtctcttctt
tcctttttaaaacttaaaccatttattgatagagaatggtggcatagaacaatacagcgt
cctgtcacaatgggagatgaaggaggacttaggcgtttacagtccctaattaaaaatatt
acacttagaagaacaaagacaagcaaaattaaaggaaaacctgttttggagttaccagaa
cgtaaagtatttattcagcacattacactttcagatgaagagagaaagatttatcagtct
gtgaaaaatgaaggcagagccactattggaaggtattttaatgaagggactgtcctggca
cattatgcagatgtcctgggtcttttgcttagactgcggcaaatttgttgccatacttac
cttcttacaaatgcagtgtcttccaatggcccctcaggaaatgatacacctgaagaactg
agaaagaagttaataaggaagatgaagttaattctgagctcaggttcagatgaggaatgt
gcaatttgcctggattctttaacagttcctgtgataacacattgtgcacatgtattttgt
aaaccctgtatttgccaagtcattcagaatgagcagccacatgctaaatgccctttatgc
agaaatgatatacatgaagataatttattagaatgtcctccagaagaattagcacgtgac
agtgagaaaaagtctgatatggaatggacatccagttcaaagattaatgcgctaatgcac
gcattgactgacttaagaaagaagaatcccaacataaaaagtttggttgtttctcagttt
acaacattcctgtctttaatagaaataccacttaaagcctctggatttgtgtttactcgt
ttggatggttccatggcccaaaagaaaagagttgaatcaattcagtgttttcaaaacact
gaagcaggatctccaactataatgcttctgtccttaaaagcaggtggagttggtttgaat
ctgtctgcagcttctcgagtgtttttaatggatccagcctggaatcctgctgctgaagat
cagtgctttgacagatgccatagacttggtcagaagcaagaagttatcatcacaaaattc
attgtaaaggactctgttgaagaaaatatgctgaaaatacaaaacaaaaagagagaactt
gcagcaggagcctttggaactaaaaaaccaaatgctgacgaaatgaaacaagccaaaatt
aatgaaatcagaacattaattgacttataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Disease (1)   
   OMIM (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (5)   
   OC (1)   
   PHAROS (1)   
Protein sequence (17)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (14)   
DNA sequence (34)   
   RefSeq(nuc) (14)   
   GenBank (10)   
   EMBL (10)   
3D Structure (9)   
   PDB (9)   
Protein domain (18)   
   Pfam (18)   
All databases (106)   

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