KEGG   Homo sapiens (human): 6596
Entry
6596              CDS       T01001                                 
Symbol
HLTF, HIP116, HIP116A, HLTF1, RNF80, SMARCA3, SNF2L3, ZBU1
Name
(RefSeq) helicase like transcription factor
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
hsa  Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hsa04121]
    6596 (HLTF)
   03400 DNA repair and recombination proteins [BR:hsa03400]
    6596 (HLTF)
Enzymes [BR:hsa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     6596 (HLTF)
Ubiquitin system [BR:hsa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    6596 (HLTF)
DNA repair and recombination proteins [BR:hsa03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    6596 (HLTF)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX DEAD zf-RING_2 zf-RING_5 RING_XB3-XBAT31 ResIII zf-ANAPC11 zf-C3HC4_4 zf-Nse HDA2-3 Prok-RING_4 zf-rbx1 zf-RING_6
Other DBs
NCBI-GeneID: 6596
NCBI-ProteinID: NP_001305864
OMIM: 603257
HGNC: 11099
Ensembl: ENSG00000071794
UniProt: Q14527 A8K5B6
Structure
Position
3:complement(149030063..149086533)
AA seq 1009 aa
MSWMFKRDPVWKYLQTVQYGVHGNFPRLSYPTFFPRFEFQDVIPPDDFLTSDEEVDSVLF
GSLRGHVVGLRYYTGVVNNNEMVALQRDPNNPYDKNAIKVNNVNGNQVGHLKKELAGALA
YIMDNKLAQIEGVVPFGANNAFTMPLHMTFWGKEENRKAVSDQLKKHGFKLGPAPKTLGF
NLESGWGSGRAGPSYSMPVHAAVQMTTEQLKTEFDKLFEDLKEDDKTHEMEPAEAIETPL
LPHQKQALAWMVSRENSKELPPFWEQRNDLYYNTITNFSEKDRPENVHGGILADDMGLGK
TLTAIAVILTNFHDGRPLPIERVKKNLLKKEYNVNDDSMKLGGNNTSEKADGLSKDASRC
SEQPSISDIKEKSKFRMSELSSSRPKRRKTAVQYIESSDSEEIETSELPQKMKGKLKNVQ
SETKGRAKAGSSKVIEDVAFACALTSSVPTTKKKMLKKGACAVEGSKKTDVEERPRTTLI
ICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIREPALLSKQDIVLTTYNILTHDYGT
KGDSPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLESERRWVLTGTPIQNSLKDLWSLL
SFLKLKPFIDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTSKIKGKPVLELPE
RKVFIQHITLSDEERKIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTY
LLTNAVSSNGPSGNDTPEELRKKLIRKMKLILSSGSDEECAICLDSLTVPVITHCAHVFC
KPCICQVIQNEQPHAKCPLCRNDIHEDNLLECPPEELARDSEKKSDMEWTSSSKINALMH
ALTDLRKKNPNIKSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQCFQNT
EAGSPTIMLLSLKAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKF
IVKDSVEENMLKIQNKKRELAAGAFGTKKPNADEMKQAKINEIRTLIDL
NT seq 3030 nt   +upstreamnt  +downstreamnt
atgtcctggatgttcaagagggatccagtttggaagtacttgcagactgtccagtatgga
gttcatggaaattttccacgcctctcatatccaactttctttccacgttttgaattccaa
gatgttatccctccagatgactttctaactagtgatgaagaagtagattccgttttattt
ggaagtttgagaggtcatgtggttggactacgctattacacgggagtagttaataataat
gaaatggttgcattacaacgagatcctaataacccttatgataagaatgcaattaaagta
aacaatgtgaatggaaatcaagttggccatttaaagaaagagcttgcaggtgctttggcc
tatatcatggacaacaaattggcacaaattgaaggggtagttccttttggtgcaaacaat
gcttttaccatgcctctgcatatgactttttggggaaaagaagaaaatagaaaagcggtt
tcagatcagttgaagaaacatggatttaaattgggtcctgcaccaaaaactttaggattc
aatttggaaagtggttggggctctggaagagctggaccaagctatagtatgccagtgcat
gctgcagtacagatgacaactgaacagcttaaaacagaatttgacaaattgtttgaagat
ttaaaagaagatgataaaacccatgaaatggaaccagctgaggctattgaaacaccactg
cttccacatcaaaaacaagctctagcttggatggtgtcacgggaaaatagcaaagaactt
ccaccattctgggaacagcgaaatgacttatactataacacaataacaaatttttctgag
aaggaccgaccagaaaatgtccatggaggaattttagctgatgatatgggtttgggtaaa
actcttacggccattgcagtaatccttaccaacttccatgatggcagacctcttcctatt
gaaagagttaaaaagaatctactgaagaaggaatataatgttaacgatgactctatgaaa
cttggaggaaacaataccagtgaaaaggcagatggactaagcaaagacgcatctagatgt
agtgaacaacccagtatttcagatatcaaggagaagagtaagtttcgcatgtcagaattg
tctagctcccgccccaaaagaagaaaaactgctgtccagtacatagaaagcagtgattca
gaggaaattgaaacaagtgaattgccgcagaaaatgaaaggcaaactgaaaaatgtacag
tctgaaactaaaggcagggcgaaagcaggatcttctaaggttatagaagatgtggcattt
gcatgtgcattaacttcatctgttcctacaacaaaaaagaaaatgttgaaaaagggagct
tgtgcagtggaggggtcaaagaaaactgatgttgaggagagaccaagaacaacactgatc
atctgtccgctttctgtgttaagcaactggattgaccagtttggacaacatataaaatca
gatgtacacttgaatttttatgtttattatggtcctgatcgtattagagaaccggcctta
ctttcaaaacaggatattgttttgactacgtataatattttaactcatgactatggaact
aaaggagatagtccattacatagcataaggtggctaagagtgatcctggatgaaggacat
gccatacgaaatccaaatgctcagcagacaaaagctgtacttgacttagaatcagaaaga
agatgggttttgacaggtactccaatccagaattctttaaaggacttgtggtctcttctt
tcctttttaaaacttaaaccatttattgatagagaatggtggcatagaacaatacagcgt
cctgtcacaatgggagatgaaggaggacttaggcgtttacagtccctaattaaaaatatt
acacttagaagaacaaagacaagcaaaattaaaggaaaacctgttttggagttaccagaa
cgtaaagtatttattcagcacattacactttcagatgaagagagaaagatttatcagtct
gtgaaaaatgaaggcagagccactattggaaggtattttaatgaagggactgtcctggca
cattatgcagatgtcctgggtcttttgcttagactgcggcaaatttgttgccatacttac
cttcttacaaatgcagtgtcttccaatggcccctcaggaaatgatacacctgaagaactg
agaaagaagttaataaggaagatgaagttaattctgagctcaggttcagatgaggaatgt
gcaatttgcctggattctttaacagttcctgtgataacacattgtgcacatgtattttgt
aaaccctgtatttgccaagtcattcagaatgagcagccacatgctaaatgccctttatgc
agaaatgatatacatgaagataatttattagaatgtcctccagaagaattagcacgtgac
agtgagaaaaagtctgatatggaatggacatccagttcaaagattaatgcgctaatgcac
gcattgactgacttaagaaagaagaatcccaacataaaaagtttggttgtttctcagttt
acaacattcctgtctttaatagaaataccacttaaagcctctggatttgtgtttactcgt
ttggatggttccatggcccaaaagaaaagagttgaatcaattcagtgttttcaaaacact
gaagcaggatctccaactataatgcttctgtccttaaaagcaggtggagttggtttgaat
ctgtctgcagcttctcgagtgtttttaatggatccagcctggaatcctgctgctgaagat
cagtgctttgacagatgccatagacttggtcagaagcaagaagttatcatcacaaaattc
attgtaaaggactctgttgaagaaaatatgctgaaaatacaaaacaaaaagagagaactt
gcagcaggagcctttggaactaaaaaaccaaatgctgacgaaatgaaacaagccaaaatt
aatgaaatcagaacattaattgacttataa

  All links  
Disease (1)   
   OMIM (1)   
Gene (18)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (5)   
   OC (1)   
Protein sequence (17)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (14)   
DNA sequence (34)   
   RefSeq(nuc) (14)   
   GenBank (10)   
   EMBL (10)   
3D Structure (9)   
   PDB (9)   
Protein domain (19)   
   Pfam (19)   
All databases (98)   

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