KEGG   Homo sapiens (human): 6632
Entry
6632              CDS       T01001                                 
Symbol
SNRPD1, HsT2456, SMD1, SNRPD, Sm-D1
Name
(RefSeq) small nuclear ribonucleoprotein Sm D1 isoform 1
  KO
K11087  small nuclear ribonucleoprotein D1
Organism
hsa  Homo sapiens (human)
Pathway
hsa03040  Spliceosome
hsa05322  Systemic lupus erythematosus
Network
nt06547  Spliceosome
  Element
N01963  Sm core assembly and 3 end processing of pre U1 snRNA
N01964  pre U1 snRNP import and U1 snRNP formation
N01968  Spliceosome assembly (E and A complex formation)
N01969  U4/U6-U5 snRNP fomation
N01970  Spliceosome assembly (B complex formation)
N01971  spliceosome activation
N01972  Spliceosome catalysis (branching)
N01993  Spliceosome catalysis (exon ligation)
N01994  Spliceosome disassembly
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    6632 (SNRPD1)
 09160 Human Diseases
  09163 Immune disease
   05322 Systemic lupus erythematosus
    6632 (SNRPD1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsa03041]
    6632 (SNRPD1)
   03032 DNA replication proteins [BR:hsa03032]
    6632 (SNRPD1)
Spliceosome [BR:hsa03041]
 Complex A
  U1 snRNP components
   Sm proteins
    6632 (SNRPD1)
  U2 snRNP components
    6632 (SNRPD1)
 Complex B
  U1 snRNP components
    6632 (SNRPD1)
  U4/U6.U5 tri-snRNP components
    6632 (SNRPD1)
 Complex C
  U2 snRNP components
    6632 (SNRPD1)
DNA replication proteins [BR:hsa03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     6632 (SNRPD1)
SSDB
Motif
Pfam: LSM EBNA2_Core YomU_Tube Gemin7 Hfq AAA_RNF213_3 Phage_Hfq SM-ATX API5
Other DBs
NCBI-GeneID: 6632
NCBI-ProteinID: NP_008869
OMIM: 601063
HGNC: 11158
Ensembl: ENSP00000300413.4
UniProt: P62314
Structure
Position
18:21612314..21633520
AA seq 119 aa
MKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLETLSI
RGNNIRYFILPDSLPLDTLLVDVEPKVKSKKREAVAGRGRGRGRGRGRGRGRGRGGPRR
NT seq 360 nt   +upstreamnt  +downstreamnt
atgaagctcgtgagatttttgatgaaattgagtcatgaaactgtaaccattgaattgaag
aacggaacacaggtccatggaacaatcacaggtgtggatgtcagcatgaatacacatctt
aaagctgtgaaaatgaccctgaagaacagagaacctgtacagctggaaacgctgagtatt
cgaggaaataacattcggtattttattctaccagacagtttacctctggatacactactt
gtggatgttgaacctaaggtgaaatctaagaaaagggaagctgttgcaggaagaggcaga
ggaagaggaagaggaagaggacgtggccgtggcagaggaagagggggtcctaggcgataa

  All links  
Disease (1)   
   OMIM (1)   
Gene (46)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (30)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (22)   
   RefSeq(nuc) (2)   
   GenBank (10)   
   EMBL (10)   
3D Structure (90)   
   PDB (90)   
Protein domain (9)   
   Pfam (9)   
All databases (172)   

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