KEGG   Homo sapiens (human): 6742
Entry
6742              CDS       T01001                                 
Symbol
SSBP1, Mt-SSB, OPA13, SOSS-B1, SSBP, mtSSB
Name
(RefSeq) single stranded DNA binding protein 1
  KO
K03111  single-strand DNA-binding protein
Organism
hsa  Homo sapiens (human)
Pathway
hsa03030  DNA replication
hsa03430  Mismatch repair
hsa03440  Homologous recombination
Disease
H01020  Optic atrophy
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    6742 (SSBP1)
   03430 Mismatch repair
    6742 (SSBP1)
   03440 Homologous recombination
    6742 (SSBP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hsa03032]
    6742 (SSBP1)
   03400 DNA repair and recombination proteins [BR:hsa03400]
    6742 (SSBP1)
   03029 Mitochondrial biogenesis [BR:hsa03029]
    6742 (SSBP1)
DNA replication proteins [BR:hsa03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    6742 (SSBP1)
DNA repair and recombination proteins [BR:hsa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     6742 (SSBP1)
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    6742 (SSBP1)
Mitochondrial biogenesis [BR:hsa03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Other Mitochondrial DNA replication factors
    6742 (SSBP1)
SSDB
Motif
Pfam: SSB
Other DBs
NCBI-GeneID: 6742
NCBI-ProteinID: NP_001243439
OMIM: 600439
HGNC: 11317
Ensembl: ENSG00000106028
UniProt: Q04837 A4D1U3
Structure
Position
7:141738321..141750488
AA seq 148 aa
MFRRPVLQVLRQFVRHESETTTSLVLERSLNRVHLLGRVGQDPVLRQVEGKNPVTIFSLA
TNEMWRSGDSEVYQLGDVSQKTTWHRISVFRPGLRDVAYQYVKKGSRIYLEGKIDYGEYM
DKNNVRRQATTIIADNIIFLSDQTKEKE
NT seq 447 nt   +upstreamnt  +downstreamnt
atgtttcgaagacctgtattacaggtacttcgtcagtttgtaagacatgagtccgaaaca
actaccagtttggttcttgaaagatccctgaatcgtgtgcacttacttgggcgagtgggt
caggaccctgtcttgagacaggtggaaggaaaaaatccagtcacaatattttctctagca
actaatgagatgtggcgatcaggggatagtgaagtttaccaactgggtgatgtcagtcaa
aagacaacatggcacagaatatcagtattccggccaggcctcagagacgtggcatatcaa
tatgtgaaaaaggggtctcgaatttatttggaagggaaaatagactatggtgaatacatg
gataaaaataatgtgaggcgacaagcaacaacaatcatagctgataatattatatttctg
agtgaccagacgaaagagaaggagtag

  All links  
Disease (2)   
   OMIM (2)   
Gene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (9)   
   OC (1)   
   PRONIT (3)   
Protein sequence (16)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (13)   
DNA sequence (42)   
   RefSeq(nuc) (14)   
   GenBank (14)   
   EMBL (14)   
3D Structure (5)   
   PDB (5)   
Protein domain (1)   
   Pfam (1)   
All databases (83)   

Download RDF
DBGET integrated database retrieval system