KEGG   Homo sapiens (human): 6742Help
Entry
6742              CDS       T01001                                 

Gene name
SSBP1, Mt-SSB, SOSS-B1, SSBP, mtSSB
Definition
(RefSeq) single stranded DNA binding protein 1
  KO
K03111  single-strand DNA-binding protein
Organism
hsa  Homo sapiens (human)
Pathway
hsa03030  DNA replication
hsa03430  Mismatch repair
hsa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    6742 (SSBP1)
   03430 Mismatch repair
    6742 (SSBP1)
   03440 Homologous recombination
    6742 (SSBP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hsa03032]
    6742 (SSBP1)
   03400 DNA repair and recombination proteins [BR:hsa03400]
    6742 (SSBP1)
   03029 Mitochondrial biogenesis [BR:hsa03029]
    6742 (SSBP1)
DNA replication proteins [BR:hsa03032]
 Prokaryotic Type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    6742 (SSBP1)
DNA repair and recombination proteins [BR:hsa03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     6742 (SSBP1)
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    6742 (SSBP1)
Mitochondrial biogenesis [BR:hsa03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Other Mitochondrial DNA replication factors
    6742 (SSBP1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: SSB
Motif
Other DBs
NCBI-GeneID: 6742
NCBI-ProteinID: NP_001243439
OMIM: 600439
HGNC: 11317
Ensembl: ENSG00000106028
Vega: OTTHUMG00000157572
Pharos: Q04837(Tbio)
UniProt: Q04837 A4D1U3
Structure
PDB: 

Position
7q34
AA seq 148 aa AA seqDB search
MFRRPVLQVLRQFVRHESETTTSLVLERSLNRVHLLGRVGQDPVLRQVEGKNPVTIFSLA
TNEMWRSGDSEVYQLGDVSQKTTWHRISVFRPGLRDVAYQYVKKGSRIYLEGKIDYGEYM
DKNNVRRQATTIIADNIIFLSDQTKEKE
NT seq 447 nt NT seq  +upstreamnt  +downstreamnt
atgtttcgaagacctgtattacaggtacttcgtcagtttgtaagacatgagtccgaaaca
actaccagtttggttcttgaaagatccctgaatcgtgtgcacttacttgggcgagtgggt
caggaccctgtcttgagacaggtggaaggaaaaaatccagtcacaatattttctctagca
actaatgagatgtggcgatcaggggatagtgaagtttaccaactgggtgatgtcagtcaa
aagacaacatggcacagaatatcagtattccggccaggcctcagagacgtggcatatcaa
tatgtgaaaaaggggtctcgaatttatttggaagggaaaatagactatggtgaatacatg
gataaaaataatgtgaggcgacaagcaacaacaatcatagctgataatattatatttctg
agtgaccagacgaaagagaaggagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   UniGene (2)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (9)   
   OC (1)   
   PHAROS (1)   
   PRONIT (3)   
   VEGA (1)   
Protein sequence (12)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (9)   
DNA sequence (38)   
   RefSeq(nuc) (10)   
   GenBank (14)   
   EMBL (14)   
Protein domain (1)   
   Pfam (1)   
All databases (82)   

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