KEGG   Homo sapiens (human): 6872Help
Entry
6872              CDS       T01001                                 

Gene name
TAF1, BA2R, CCG1, CCGS, DYT3, DYT3/TAF1, KAT4, MRXS33, N-TAF1, NSCL2, OF, P250, TAF(II)250, TAF2A, TAFII-250, TAFII250, XDP
Definition
(RefSeq) TATA-box binding protein associated factor 1
  KO
K03125  transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1]
Organism
hsa  Homo sapiens (human)
Pathway
hsa03022  Basal transcription factors
Disease
H00658  Syndromic X-linked mental retardation
H00831  Primary dystonia
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    6872 (TAF1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:hsa01001]
    6872 (TAF1)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hsa03021]
    6872 (TAF1)
   03036 Chromosome and associated proteins [BR:hsa03036]
    6872 (TAF1)
Enzymes [BR:hsa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.1  Transferring groups other than aminoacyl groups
    2.3.1.48  histone acetyltransferase
     6872 (TAF1)
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     6872 (TAF1)
Protein kinases [BR:hsa01001]
 Serine/threonine kinases: Other
  TAF1 family
   6872 (TAF1)
Transcription machinery [BR:hsa03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     6872 (TAF1)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Histone modification proteins
   HATs (histone acetyltransferases)
    6872 (TAF1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DUF3591 Bromodomain TBP-binding zf-CCHC_6 Opi1
Motif
Other DBs
NCBI-GeneID: 6872
NCBI-ProteinID: NP_620278
OMIM: 313650
HGNC: 11535
Ensembl: ENSG00000147133
Vega: OTTHUMG00000022723
Pharos: P21675(Tbio)
UniProt: P21675
Structure
PDB: 

Position
Xq13.1
AA seq 1872 aa AA seqDB search
MGPGCDLLLRTAATITAAAIMSDTDSDEDSAGGGPFSLAGFLFGNINGAGQLEGESVLDD
ECKKHLAGLGALGLGSLITELTANEELTGTDGALVNDEGWVRSTEDAVDYSDINEVAEDE
SRRYQQTMGSLQPLCHSDYDEDDYDADCEDIDCKLMPPPPPPPGPMKKDKDQDSITGEKV
DFSSSSDSESEMGPQEATQAESEDGKLTLPLAGIMQHDATKLLPSVTELFPEFRPGKVLR
FLRLFGPGKNVPSVWRSARRKRKKKHRELIQEEQIQEVECSVESEVSQKSLWNYDYAPPP
PPEQCLSDDEITMMAPVESKFSQSTGDIDKVTDTKPRVAEWRYGPARLWYDMLGVPEDGS
GFDYGFKLRKTEHEPVIKSRMIEEFRKLEENNGTDLLADENFLMVTQLHWEDDIIWDGED
VKHKGTKPQRASLAGWLPSSMTRNAMAYNVQQGFAATLDDDKPWYSIFPIDNEDLVYGRW
EDNIIWDAQAMPRLLEPPVLTLDPNDENLILEIPDEKEEATSNSPSKESKKESSLKKSRI
LLGKTGVIKEEPQQNMSQPEVKDPWNLSNDEYYYPKQQGLRGTFGGNIIQHSIPAVELRQ
PFFPTHMGPIKLRQFHRPPLKKYSFGALSQPGPHSVQPLLKHIKKKAKMREQERQASGGG
EMFFMRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYYKRKPGKDPGAPDCKYG
ETVYCHTSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQGYYIRELVDIF
VVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRRIRMEDIKKAFPSHSES
SIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKD
AGYGEKSFFAPEEENEEDFQMKIDDEVRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCG
EGFSYVKIPNKPTQQKDDKEPQPVKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKL
SRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLSST
EVLSTDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQLSREREEQERKELQRMLLAAGSAA
SGNNHRDDDTASVTSLNSSATGRCLKIYRTFRDEEGKEYVRCETVRKPAVIDAYVRIRTT
KDEEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEKEKLKGPPEKKPKKMKERPDL
KLKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVIHNDNEELIKVEG
TKIVLGKQLIESADEVRRKSLVLKFPKQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRRTD
PMVTLSSILESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYP
SREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKEDKLARLEKAINPLLD
DDDQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKH
KYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEIVNVCYQTLTEYDEHLTQLEKDICT
AKEAALEEAELESLDPMTPGPYTPQPPDLYDTNTSLSMSRDASVFQDESNMSVLDIPSAT
PEKQVTQEGEDGDGDLADEEEGTVQQPQASVLYEDLLMSEGEDDEEDAGSDEEGDNPFSA
IQLSESGSDSDVGSGGIRPKQPRMLQENTRMDMENEESMMSYEGDGGEASHGLEDSNISY
GSYEEPDPKSNTQDTSFSSIGGYEVSEEEEDEEEEEQRSGPSVLSQVHLSEDEEDSEDFH
SIAGDSDLDSDE
NT seq 5619 nt NT seq  +upstreamnt  +downstreamnt
atgggacccggctgcgatttgctgctgcggacagcagctaccatcactgctgccgccatc
atgtcagacacggacagcgacgaagattccgctggaggcggcccattttctttagcgggt
ttccttttcggcaacatcaatggagccgggcagctggagggggaaagcgtcttggatgat
gaatgtaagaagcacttggcaggcttgggggctttggggctgggcagcctgatcactgaa
ctcacggcaaatgaagaattgaccgggactgacggtgccttggtaaatgatgaagggtgg
gttaggagtacagaagatgctgtggactattcagacatcaatgaggtggcagaagatgaa
agccgaagataccagcagacgatggggagcttgcagcccctttgccactcagattatgat
gaagatgactatgatgctgattgtgaagacattgattgcaagttgatgcctcctccacct
ccacccccgggaccaatgaagaaggataaggaccaggattctattactggtgagaaagtg
gacttcagtagttcctctgactcagaatctgagatgggacctcaggaagcaacacaggca
gaatctgaagatggaaagctgacccttccattggctgggattatgcagcatgatgccacc
aagctgttgccaagtgtcacagaactttttccagaatttcgacctggaaaggtgttacgt
tttctacgtctttttggaccagggaagaatgtcccatctgtttggcggagtgctcggaga
aagaggaagaagaagcaccgtgagctgatacaggaagagcagatccaggaggtggagtgc
tcagtagaatcagaagtcagccagaagtctttgtggaactacgactacgctccaccacca
cctccagagcagtgtctctctgatgatgaaatcacgatgatggctcctgtggagtccaaa
ttttcccaatcaactggagatatagataaagtgacagataccaaaccaagagtggctgag
tggcgttatgggcctgcccgactgtggtatgatatgctgggtgtccctgaagatggcagt
gggtttgactatggcttcaaactgagaaagacagaacatgaacctgtgataaaatctaga
atgatagaggaatttaggaaacttgaggaaaacaatggcactgatcttctggctgatgaa
aacttcctgatggtgacacagctgcattgggaggatgatatcatctgggatggggaggat
gtcaaacacaaagggacaaaacctcagcgtgcaagcctggcaggctggcttccttctagc
atgactaggaatgcgatggcttacaatgttcagcaaggttttgcagccactcttgatgat
gacaaaccttggtactccatttttcccattgacaatgaggatctggtatatggacgctgg
gaggacaatatcatttgggatgctcaggccatgccccggctgttggaacctcctgttttg
acacttgatcccaatgatgagaacctcattttggaaattcctgatgagaaggaagaggcc
acctctaactccccctccaaggagagtaagaaggaatcatctctgaagaagagtcgaatt
ctcttagggaaaacaggagtcatcaaggaggaaccacagcagaacatgtctcagccagaa
gtgaaagatccatggaatctctccaatgatgagtattattatcccaagcaacagggtctt
cgaggcacctttggagggaatattatccagcattcaattcctgctgtggaattacggcag
cccttctttcccacccacatggggcccatcaaactccggcagttccatcgcccacctctg
aaaaagtactcatttggtgcactttctcagccaggtccccactcagtccaacctttgcta
aagcacatcaaaaaaaaggccaagatgagagaacaagagaggcaagcttcaggtggtgga
gagatgttttttatgcgcacacctcaggacctcacaggcaaagatggtgatcttattctt
gcagaatatagtgaggaaaatggacccttaatgatgcaggttggcatggcaaccaagata
aagaactattataaacggaaacctggaaaagatcctggagcaccagattgtaaatatggg
gaaactgtttactgccatacatctcctttcctgggttctctccatcctggccaattgctg
caagcatttgagaacaacctttttcgtgctccaatttatcttcataagatgccagaaact
gatttcttgatcattcggacaagacagggttactatattcgggaattagtggatattttt
gtggttggccagcagtgtcccttgtttgaagttcctgggcctaactccaaaagggccaat
acgcatattcgagactttctacaggtttttatttaccgccttttctggaaaagtaaagat
cggccacggaggatacgaatggaagatataaaaaaagcctttccttcccattcagaaagc
agcatccggaagaggctaaagctctgcgctgacttcaaacgcacagggatggactcaaac
tggtgggtgcttaagtctgattttcgtttaccaacggaagaagagatcagagctatggtg
tcaccagagcagtgctgtgcttattatagcatgatagctgcagagcaacgactgaaggat
gctggctatggtgagaaatccttttttgctccagaagaagaaaatgaggaagatttccag
atgaagattgatgatgaagttcgcactgccccttggaacaccacaagggccttcattgct
gccatgaagggcaagtgtctgctagaggtgactggggtggcagatcccacggggtgtggt
gaaggattctcctatgtgaagattccaaacaaaccaacacagcagaaggatgataaagaa
ccgcagccagtgaagaagacagtgacaggaacagatgcagaccttcgtcgcctttccctg
aaaaatgccaagcaacttctacgtaaatttggtgtgcctgaggaagagattaaaaagttg
tcccgctgggaagtgattgatgtggtgcgcacaatgtcaacagaacaggctcgttctgga
gaggggcccatgagtaaatttgcccgtggatcaaggttttctgtggctgagcatcaagag
cgttacaaagaggaatgtcagcgcatctttgacctacagaacaaggttctgtcatcaact
gaagtcttatcaactgacacagacagcagctcagctgaagatagtgactttgaagaaatg
ggaaagaacattgagaacatgttgcagaacaagaaaaccagctctcagctttcacgtgaa
cgggaggaacaggagcggaaggaactacagcgaatgctactggcagcaggctcagcagca
tccggaaacaatcacagagatgatgacacagcttccgtgactagccttaactcttctgcc
actggacgctgtctcaagatttatcgcacgtttcgagatgaagaggggaaagagtatgtt
cgctgtgagacagtccgaaaaccagctgtcattgatgcctatgtgcgcatacggactaca
aaagatgaggaattcattcgaaaatttgccctttttgatgaacaacatcgggaagagatg
cgaaaagaacggcggaggattcaagagcaactgaggcggcttaagaggaaccaggaaaag
gagaagcttaagggtcctcctgagaagaagcccaagaaaatgaaggagcgtcctgaccta
aaactgaaatgtggggcatgtggtgccattggacacatgaggactaacaaattctgcccc
ctctattatcaaacaaatgcgccaccttccaaccctgttgccatgacagaagaacaggag
gaggagttggaaaagacagtcattcataatgataatgaagaacttatcaaggttgaaggg
accaaaattgtcttggggaaacagctaattgagagtgcggatgaggttcgcagaaaatct
ctggttctcaagtttcctaaacagcagcttcctccaaagaagaaacggcgagttggaacc
actgttcactgtgactatttgaatagacctcataagtccatccaccggcgccgcacagac
cctatggtgacgctgtcgtccatcttggagtctatcatcaatgacatgagagatcttcca
aatacataccctttccacactccagtcaatgcaaaggttgtaaaggactactacaaaatc
atcactcggccaatggacctacaaacactccgcgaaaacgtgcgtaaacgcctctaccca
tctcgggaagagttcagagagcatctggagctaattgtgaaaaatagtgcaacctacaat
gggccaaaacactcattgactcagatctctcaatccatgctggatctctgtgatgaaaaa
ctcaaagagaaagaagacaaattagctcgcttagagaaagctatcaaccccttgctggat
gatgatgaccaagtggcgttttctttcattctggacaacattgtcacccagaaaatgatg
gcagttccagattcttggccatttcatcacccagttaataagaaatttgttccagattat
tacaaagtgattgtcaatccaatggatttagagaccatacgtaagaacatctccaagcac
aagtatcagagtcgggagagctttctggatgatgtaaaccttattctggccaacagtgtt
aagtataatggacctgagagtcagtatactaagactgcccaggagattgtgaacgtctgt
taccagacattgactgagtatgatgaacatttgactcaacttgagaaggatatttgtact
gctaaagaagcagctttggaggaagcagaattagaaagcctggacccaatgaccccaggg
ccctacacgcctcagcctcctgatttgtatgataccaacacatccctcagtatgtctcga
gatgcctctgtatttcaagatgagagcaatatgtctgtcttggatattcccagtgccact
ccagaaaagcaggtaacacaggaaggtgaagatggagatggtgatcttgcagatgaagag
gaaggaactgtacaacagcctcaagccagtgtcctgtatgaggatttgcttatgtctgaa
ggagaagatgatgaggaagatgctgggagtgatgaagaaggagacaatcctttctctgct
atccagctgagtgaaagtggaagtgactctgatgtgggatctggtggaataagacccaaa
caaccccgcatgcttcaggagaacacaaggatggacatggaaaatgaagaaagcatgatg
tcctatgagggagacggtggggaggcttcccatggtttggaggatagcaacatcagttat
gggagctatgaggagcctgatcccaagtcgaacacccaagacacaagcttcagcagcatc
ggtgggtatgaggtatcagaggaggaagaagatgaggaggaggaagagcagcgctctggg
ccgagcgtactaagccaggtccacctgtcagaggacgaggaggacagtgaggatttccac
tccattgctggggacagtgacttggactctgatgaatga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (5)   
   KEGG DISEASE (2)   
   OMIM (3)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
   PHAROS (1)   
   VEGA (1)   
Protein sequence (11)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (9)   
DNA sequence (64)   
   RefSeq(nuc) (20)   
   GenBank (22)   
   EMBL (22)   
Protein domain (5)   
   Pfam (5)   
All databases (123)   

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