KEGG   Homo sapiens (human): 6877
Entry
6877              CDS       T01001                                 
Symbol
TAF5, TAF(II)100, TAF2D, TAFII-100, TAFII100
Name
(RefSeq) TATA-box binding protein associated factor 5
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
hsa  Homo sapiens (human)
Pathway
hsa03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    6877 (TAF5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hsa03021]
    6877 (TAF5)
   03036 Chromosome and associated proteins [BR:hsa03036]
    6877 (TAF5)
Transcription machinery [BR:hsa03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     6877 (TAF5)
   Coactivators
    SAGA/TFTC/STAGA complex
     6877 (TAF5)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     6877 (TAF5)
    STAGA complex
     6877 (TAF5)
    TFTC complex
     6877 (TAF5)
    SAGA complex
     6877 (TAF5)
    SLIK complex
     6877 (TAF5)
SSDB
Motif
Pfam: WD40 WD40_Prp19 TFIID_NTD2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML WDR55 NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_SPT8 WD_LRWD1 Beta-prop_DCAF12 Beta-prop_Nup120_160 PEP5_VPS11_N RAB3GAP2_N CDK5RAP3 Beta-prop_RIG_1st eIF2A Cytochrom_D1 ABM-like PROPPIN Late_protein_L2
Other DBs
NCBI-GeneID: 6877
NCBI-ProteinID: NP_008882
OMIM: 601787
HGNC: 11539
Ensembl: ENSG00000148835
UniProt: Q15542
Structure
Position
10:103367976..103389065
AA seq 800 aa
MAALAEEQTEVAVKLEPEGPPTLLPPQAGDGAGEGSGGTTNNGPNGGGGNVAASSSTGGD
GGTPKPTVAVSAAAPAGAAPVPAAAPDAGAPHDRQTLLAVLQFLRQSKLREAEEALRREA
GLLEEAVAGSGAPGEVDSAGAEVTSALLSRVTASAPGPAAPDPPGTGASGATVVSGSASG
PAAPGKVGSVAVEDQPDVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQLF
YPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDF
RTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLA
GEAKREANKSKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDPN
APPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTD
DSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILY
GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF
VSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGN
CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS
RDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPV
VHLHFTRRNLVLAAGAYSPQ
NT seq 2403 nt   +upstreamnt  +downstreamnt
atggcggcgctggcggaggagcagacggaggtggcggtcaagctagagcctgagggaccg
ccaacgctgctacctccgcaggcgggggacggcgcaggcgagggtagcggcggcactacc
aacaacggccccaacggcggcggcgggaacgttgcggcgtcgtcgtccactggcggggat
ggcgggacccccaagcccacggtggctgtctccgccgctgccccggcgggggcggccccg
gtgcccgccgctgctccggacgccggcgctccgcatgaccgacagactctactggccgtg
ctgcagttcctacggcagagcaaactccgcgaggccgaagaggcgctgcgccgtgaggcc
gggctgctggaggaggcagtggcgggctccggagccccgggagaggtggacagcgccggc
gctgaggtgaccagcgcgcttctcagccgggtgaccgcctcggcccctggccctgcggcc
cccgaccctccgggcactggcgcttcgggggccacggtcgtctcaggttcagcctcaggt
cctgcggctccgggtaaagttggaagtgttgctgtggaagaccagccagatgtcagtgcc
gtgttgtcagcctacaaccaacaaggagatcccacaatgtatgaagaatactatagtgga
ctgaaacacttcattgaatgttccctggactgccatcgggcagagttgtcccaacttttt
tatcctctgtttgtgcacatgtacttggagctagtctacaatcaacatgagaatgaagca
aagtcattctttgagaagttccatggagatcaggaatgttattaccaggatgacctacga
gtattatctagtcttaccaaaaaggaacacatgaaagggaatgagaccatgttggatttt
cgaacaagtaaatttgttctgcgtatttcccgtgactcgtaccaactcttgaagaggcat
cttcaggagaaacagaacaatcagatatggaacatagttcaggagcacctctacattgac
atctttgatgggatgccgcgtagtaagcaacagatagatgcgatggtgggaagtttggca
ggagaggctaaacgagaggcaaacaaatcaaaggtattttttggtttattaaaagaacca
gaaattgaggtacctttggatgacgaggatgaagagggagaaaatgaagaaggaaaacct
aaaaagaagaagcctaaaaaagatagtattggatccaaaagcaaaaaacaagatcccaat
gctccacctcagaacagaatccctcttcctgagttgaaagattcagataagttggataag
ataatgaatatgaaagaaaccaccaaacgagtgcgccttgggccggactgcttaccctcc
atttgtttctatacatttctcaatgcttaccagggtctcactgcagtggatgtcactgat
gattctagtctgattgctggaggttttgcagattcaactgtcagagtgtggtcggtaaca
cccaaaaagcttcgtagtgtcaaacaagcatcagatcttagtcttatagacaaagaatca
gatgatgtcttagaaagaatcatggatgagaaaacagcaagtgagttgaagattttgtat
ggtcacagtgggcctgtctacggagccagcttcagtccggataggaactatctgctttcc
tcttcagaggacggaactgttagattgtggagccttcaaacatttacttgtttggtggga
tataaaggacacaactatccagtatgggacacacaattttctccatatggatattatttt
gtgtcagggggccatgaccgagtagctcggctctgggctacagaccactatcagccttta
agaatatttgccggccatcttgctgatgtgaattgtaccagattccatccaaattctaat
tatgttgctacgggctctgcagacagaactgtgcggctctgggacgtcctgaatggtaac
tgtgtaaggatcttcactggacacaagggaccaattcattccttgacattttctcccaat
gggagattcctggctacaggagcaacagatggcagagtgcttctttgggatattggacat
ggtttgatggttggagaattaaaaggccacactgatacagtctgttcacttaggtttagt
agagatggtgaaattttggcatcaggttcaatggataatacagttcgattatgggatgct
atcaaagcctttgaagatttagagaccgatgactttactacagccactgggcatataaat
ttacctgagaattcacaggagttattgttgggaacatatatgaccaaatcaacaccagtt
gtacaccttcattttactcgaagaaacctggttctagctgcaggagcttatagtccacaa
taa

  All links  
Disease (1)   
   OMIM (1)   
Gene (16)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (24)   
   RefSeq(nuc) (2)   
   GenBank (11)   
   EMBL (11)   
3D Structure (35)   
   PDB (35)   
Protein domain (42)   
   Pfam (42)   
All databases (122)   

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