KEGG   Homo sapiens (human): 6908Help
Entry
6908              CDS       T01001                                 

Gene name
TBP, GTF2D, GTF2D1, HDL4, SCA17, TFIID
Definition
(RefSeq) TATA-box binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
hsa  Homo sapiens (human)
Pathway
hsa03022  Basal transcription factors
hsa05016  Huntington disease
hsa05165  Human papillomavirus infection
hsa05166  HTLV-I infection
hsa05168  Herpes simplex infection
hsa05169  Epstein-Barr virus infection
hsa05203  Viral carcinogenesis
Network
N00195  HPV E7 to host-cell-protein inhibition
N00221  HTLV-I Tax to host-cell-protein activation
N00273  HCV NS5A to host-cell-protein inhibition
N00376  HPV E7 to TBP1-mediated transcription
Disease
H00063  Spinocerebellar ataxia (SCA)
H01243  Huntington's disease-like syndrome
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    6908 (TBP)
 09160 Human Diseases
  09161 Cancers
   05203 Viral carcinogenesis
    6908 (TBP)
  09163 Neurodegenerative diseases
   05016 Huntington disease
    6908 (TBP)
  09167 Infectious diseases
   05166 HTLV-I infection
    6908 (TBP)
   05168 Herpes simplex infection
    6908 (TBP)
   05169 Epstein-Barr virus infection
    6908 (TBP)
   05165 Human papillomavirus infection
    6908 (TBP)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hsa03000]
    6908 (TBP)
   03021 Transcription machinery [BR:hsa03021]
    6908 (TBP)
Transcription factors [BR:hsa03000]
 Eukaryotic Type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    6908 (TBP)
Transcription machinery [BR:hsa03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     6908 (TBP)
  RNA polymerase III system
    TFIIIB
     6908 (TBP)
  RNA polymerase I system
    SL1/TIF-1B
     6908 (TBP)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: TBP EPL1 DDHD Presenilin DUF4746 MMR1 UPF0565 BORG_CEP SpoIIP ABC2_membrane_2 TFIIA Otopetrin Cellulose_synt PAT1 Tim54 DUF106 FemAB DUF3295 TraV DUF4228 DUF1501 VIT1 Ndc1_Nup Sin_N
Motif
Other DBs
NCBI-GeneID: 6908
NCBI-ProteinID: NP_003185
OMIM: 600075
HGNC: 11588
Ensembl: ENSG00000112592
Vega: OTTHUMG00000016084
Pharos: P20226(Tbio)
UniProt: P20226 Q32MN7
Structure
PDB: 

Position
6q27
AA seq 339 aa AA seqDB search
MDQNNSLPPYAQGLASPQGAMTPGIPIFSPMMPYGTGLTPQPIQNTNSLSILEEQQRQQQ
QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAVQQSTSQQATQGTSGQAPQ
LFHSQTLTTAPLPGTTPLYPSPMTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDL
KTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARV
VQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRI
VLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKTT
NT seq 1020 nt NT seq  +upstreamnt  +downstreamnt
atggatcagaacaacagcctgccaccttacgctcagggcttggcctcccctcagggtgcc
atgactcccggaatccctatctttagtccaatgatgccttatggcactggactgacccca
cagcctattcagaacaccaatagtctgtctattttggaagagcaacaaaggcagcagcag
caacaacaacagcagcagcagcagcagcagcagcaacagcaacagcagcagcagcagcag
cagcagcagcagcagcagcagcagcagcagcagcagcagcaacaggcagtggcagctgca
gccgttcagcagtcaacgtcccagcaggcaacacagggaacctcaggccaggcaccacag
ctcttccactcacagactctcacaactgcacccttgccgggcaccactccactgtatccc
tcccccatgactcccatgacccccatcactcctgccacgccagcttcggagagttctggg
attgtaccgcagctgcaaaatattgtatccacagtgaatcttggttgtaaacttgaccta
aagaccattgcacttcgtgcccgaaacgccgaatataatcccaagcggtttgctgcggta
atcatgaggataagagagccacgaaccacggcactgattttcagttctgggaaaatggtg
tgcacaggagccaagagtgaagaacagtccagactggcagcaagaaaatatgctagagtt
gtacagaagttgggttttccagctaagttcttggacttcaagattcagaatatggtgggg
agctgtgatgtgaagtttcctataaggttagaaggccttgtgctcacccaccaacaattt
agtagttatgagccagagttatttcctggtttaatctacagaatgatcaaacccagaatt
gttctccttatttttgtttctggaaaagttgtattaacaggtgctaaagtcagagcagaa
atttatgaagcatttgaaaacatctaccctattctaaagggattcaggaagacgacgtaa

DBGET integrated database retrieval system