KEGG   Homo sapiens (human): 7343
Entry
7343              CDS       T01001                                 
Symbol
UBTF, CONDBA, NOR-90, UBF, UBF-1, UBF1, UBF2
Name
(RefSeq) upstream binding transcription factor
  KO
K09273  upstream-binding transcription factor
Organism
hsa  Homo sapiens (human)
Disease
H02476  Childhood-onset neurodegeneration with brain atrophy
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hsa03000]
    7343 (UBTF)
   03021 Transcription machinery [BR:hsa03021]
    7343 (UBTF)
Transcription factors [BR:hsa03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   UBF
    7343 (UBTF)
Transcription machinery [BR:hsa03021]
 Eukaryotic type
  RNA polymerase I system
   Other transcription-related factors
    UBF
     7343 (UBTF)
SSDB
Motif
Pfam: HMG_box_5 HMG_box HMG_box_2 HMG_WDHD1 DUF4473 Chlor_dismutase
Other DBs
NCBI-GeneID: 7343
NCBI-ProteinID: NP_055048
OMIM: 600673
HGNC: 12511
Ensembl: ENSG00000108312
UniProt: P17480
Structure
Position
17:complement(44205040..44221304)
AA seq 764 aa
MNGEADCPTDLEMAAPKGQDRWSQEDMLTLLECMKNNLPSNDSSKFKTTESHMDWEKVAF
KDFSGDMCKLKWVEISNEVRKFRTLTELILDAQEHVKNPYKGKKLKKHPDFPKKPLTPYF
RFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFR
EDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVRPDATTKEVKDSLGKQWSQLSDK
KRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITKSTLTKAERQLKDKFDGRPTKP
PPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEVELLR
FLESLPEEEQQRVLGEEKMLNINKKQATSPASKKPAQEGGKGGSEKPKRPVSAMFIFSEE
KRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAALKAQSERKPGGEREERGK
LPESPKRAEEIWQQSVIGDYLARFKNDRVKALKAMEMTWNNMEKKEKLMWIKKAAEDQKR
YERELSEMRAPPAATNSSKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEI
GSRWQRISQSQKEHYKKLAEEQQKQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSMTKLR
GPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESED
GDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSDSN
NT seq 2295 nt   +upstreamnt  +downstreamnt
atgaacggagaagccgactgccccacagacctggaaatggccgcccccaaaggccaagac
cgttggtcccaggaagacatgctgactttgctggaatgcatgaagaacaaccttccatcc
aatgacagctccaagttcaaaaccaccgaatcacacatggactgggaaaaagtagcattt
aaagacttttctggagacatgtgcaagctcaaatgggtggagatttctaatgaggtgagg
aagttccgtacattgacagaattgatcctcgatgctcaggaacatgttaaaaatccttac
aaaggcaaaaaactcaagaaacacccagacttcccaaagaagcccctgaccccttatttc
cgcttcttcatggagaagcgggccaagtatgcgaaactccaccctgagatgagcaacctg
gacctaaccaagattctgtccaagaaatacaaggagcttccggagaagaagaagatgaaa
tatattcaggacttccagagagagaaacaggagttcgagcgaaacctggcccgattcagg
gaggatcaccccgacctaatccagaatgccaagaaatcggacatcccagagaagcccaaa
accccccagcagctgtggtacacccacgagaagaaggtgtatctcaaagtgcggccagat
gccactacgaaggaggtgaaggactccctggggaagcagtggtctcagctctcggacaaa
aagaggctgaaatggattcataaggccctggagcagcggaaggagtacgaggagatcatg
agagactatatccagaagcacccagagctgaacatcagtgaggagggtatcaccaagtcc
accctcaccaaggccgaacgccagctcaaggacaagtttgacgggcgacccaccaagcca
cctccgaacagctactcgctgtactgcgcagagctcatggccaacatgaaggacgtgccc
agcacagagcgcatggtgctgtgcagccagcagtggaagctgctgtcccagaaggagaag
gacgcctatcacaagaagtgtgatcagaaaaagaaagattacgaggtggagctgctccgt
ttcctcgagagcctgcctgaggaggagcagcagcgggtcttgggggaagagaagatgctg
aacatcaacaagaagcaggccaccagccccgcctccaagaagccagcccaggaagggggc
aagggcggctccgagaagcccaagcggcccgtgtcggccatgttcatcttctcggaggag
aaacggcggcagctgcaggaggagcggcctgagctctccgagagcgagctgacccgcctg
ctggcccgaatgtggaacgacctgtctgagaagaagaaggccaagtacaaggcccgagag
gcggcgctcaaggctcagtcggagaggaagcccggcggggagcgcgaggaacggggcaag
ctgcccgagtcccccaaaagagctgaggagatctggcaacagagcgttatcggcgactac
ctggcccgcttcaagaatgaccgggtgaaggccttgaaagccatggaaatgacctggaat
aacatggaaaagaaggagaaactgatgtggattaagaaggcagccgaagaccaaaagcga
tatgagagagagctgagtgagatgcgggcacctccagctgctacaaattcttccaagaag
atgaaattccagggagaacccaagaagcctcccatgaacggttaccagaagttctcccag
gagctgctgtccaatggggagctgaaccacctgccgctgaaggagcgcatggtggagatc
ggcagtcgctggcagcgcatctcccagagccagaaggagcactacaaaaagctggccgag
gagcagcaaaagcagtacaaggtgcacctggacctctgggttaagagcctgtctccccag
gaccgtgcagcatataaagagtacatctccaataaacgtaagagcatgaccaagctgcga
ggcccaaaccccaaatccagccggactactctgcagtccaagtcggagtccgaggaggat
gatgaagaggatgaggatgacgaggacgaggatgaagaagaggaagatgatgagaatggg
gactcctctgaagatggcggcgactcctctgagtccagcagcgaggacgagagcgaggat
ggggatgagaatgaagaggatgacgaggacgaagacgacgacgaggatgacgatgaggat
gaagataatgagtccgagggcagcagctccagctcctcctcctcaggggactcctcagac
tctgactccaactga

  All links  
Disease (2)   
   OMIM (2)   
Gene (21)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (10)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (34)   
   RefSeq(nuc) (4)   
   GenBank (15)   
   EMBL (15)   
3D Structure (4)   
   PDB (4)   
Protein domain (6)   
   Pfam (6)   
All databases (72)   

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