KEGG   Homo sapiens (human): 8100
Entry
8100              CDS       T01001                                 
Symbol
IFT88, D13S1056E, DAF19, TG737, TTC10, hTg737
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform 2
  KO
K16474  intraflagellar transport protein 88
Organism
hsa  Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:hsa03037]
    8100 (IFT88)
Cilium and associated proteins [BR:hsa03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex B1
   8100 (IFT88)
SSDB
Motif
Pfam: TPR_1 TPR_2 TPR_12 TPR_19 TPR_7 TPR_8 TPR_6 TPR_14 TPR_16 CFAP70_TPR_C ANAPC3 TPR_11 RMD1-3 ARM_TT21_4th TPR_17 TPR_10 TPR_9 DUF6340 TPR_CcmH_CycH TPR-S ARM_TT21_C TPR_21 CNOT10_TPR CFAP70_mid_TPR ARM_TT21_N TPR_Psidin_N ARM_TT21_2nd TPR_15 HAT_PRP39_C TTC22_N Coatomer_E TRAPPC9-Trs120 NBD_SMAX1 DUF6584
Other DBs
NCBI-GeneID: 8100
NCBI-ProteinID: NP_001340497
OMIM: 600595
HGNC: 20606
UniProt: Q13099 A0A140VJL7
Position
13:20567157..20691444
AA seq 824 aa
MMQNVHLAPETDEDDLYSGYNDYNPIYDIEELENDAAFQQAVRTSHGRRPPITAKISSTA
VTRPIATGYGSKTSLASSIGRPMTGAIQDGVTRPMTAVRAAGFTKAALRGSAFDPLSQSR
GPASPLEAKKKDSPEEKIKQLEKEVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVR
QREQVTTPENINLDLTYSVLFNLASQYSVNEMYAEALNTYQVIVKNKMFSNAGILKMNMG
NIYLKQRNYSKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYEHIMS
MAPNLKAGYNLTICYFAIGDREKMKKAFQKLITVPLEIDEDKYISPSDDPHTNLVTEAIK
NDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDLEIN
KAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNSD
RYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALDC
FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREG
DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV
ASCFRRSGNYQKALDTYKDTHRKFPENVECLRFLVRLCTDLGLKDAQEYARKLKRLEKMK
EIREQRIKSGRDGSGGSRGKREGSASGDSGQNYSASSKGERLSARLRALPGTNEPYESSS
NKEIDASYVDPLGPQIERPKTAAKKRIDEDDFADEELGDDLLPE
NT seq 2475 nt   +upstreamnt  +downstreamnt
atgatgcaaaatgtgcacctggctccagagacagatgaagatgatctttattccggctat
aatgactacaatccaatctatgatatcgaggaattggagaatgatgcagcttttcagcaa
gctgtgaggactagtcatggcagaagacctccaataactgctaaaatatcaagcacggca
gttactagacctatagctactggatatgggtccaagacatctctggcatcatcaatagga
agaccaatgacaggggctattcaggatggagttactagacccatgacagcagtgagagca
gctggttttaccaaagcagctttgagaggctctgcatttgacccccttagtcagtcaagg
ggccctgcttcccctttggaagccaagaaaaaagatagcccagaggaaaaaataaagcaa
ttagagaaggaagtaaatgagttggtagaagaaagctgtattgccaatagttgtggagac
ttaaaattggccttagaaaaggcaaaagatgcaggaagaaaagagagagtcctggtgaga
cagcgagaacaagttacaactccagaaaatatcaatttggatttaacttactcagttctt
ttcaatttggccagtcagtattcagttaatgaaatgtatgccgaagcacttaacacttat
caagttatagtcaaaaataagatgtttagcaatgcaggaatattgaaaatgaatatggga
aatatctatttaaagcaaagaaattattccaaagccattaaattctaccgaatggcatta
gaccaagttccaagtgtcaataagcaaatgaggattaaaataatgcagaatattggagtt
acatttattcaggctggtcagtattcagatgctattaattcatatgagcacataatgagc
atggcaccaaatctgaaggcaggctacaacctaactatctgttattttgctattggagac
cgagaaaaaatgaagaaggcattccaaaaattgattactgttccattagaaattgatgaa
gataaatatatttcaccaagtgatgatcctcatactaacttagtaactgaagctataaaa
aatgatcacctcaggcaaatggaacgtgaaaggaaagccatggcagaaaaatatattatg
acatctgcaaaactcattgctcctgtaattgaaacatcttttgctgcaggttatgattgg
tgcgtggaagtggtgaaagcttctcaatatgtagagctagccaatgatctggaaataaac
aaagcagttacatacttgagacaaaaagactataaccaagctgtagagatcttaaaagtg
ttggaaaaaaaggacagtagagtgaaaagtgcagctgcaaccaatctctcagccctgtat
tatatgggaaaggattttgcacaagccagcagctatgcagatatagctgtgaactctgat
agatataatccagcagctcttactaataaagggaatacagtttttgcaaatggtgattat
gagaaggccgctgaattctataaagaggctctaagaaatgattcttcttgtactgaagca
ctttataatattggccttacctatgagaaactaaatcggctagatgaggctttggactgt
ttcctgaaacttcacgcaatcctacgaaacagtgccgaagttctttaccagatagcaaat
atatatgaattaatggaaaatcccagtcaagctattgaatggctaatgcaggtggtcagt
gttattccaaccgatcctcaagttttatctaagctaggagaattatatgatcgtgaagga
gataaatctcaagcatttcaatattactatgagtcatataggtattttccttgtaatatt
gaagtcattgagtggcttggagcctattacattgacacccaattttgggaaaaagctatt
cagtactttgaaagagcttctcttatacagcctacacaagtgaaatggcagctgatggta
gctagttgtttcagaagaagtggtaactaccaaaaagcattagatacttacaaagatact
cacagaaaatttccagaaaatgtcgaatgtctgcgtttcttagttcgtctctgcacagat
cttggattaaaagatgctcaagaatatgccagaaaactgaagaggttggaaaaaatgaaa
gaaataagggaacagcgcataaagtcaggcagagatggcagtgggggctcccgtggcaaa
agagaaggaagtgctagcggtgatagtggccagaactatagtgccagtagtaaaggtgaa
cgactaagtgccagactcagagctttacctgggacaaatgaaccttatgaaagtagcagt
aacaaagaaatagatgcctcctatgtggacccacttggccctcaaatagaacgaccaaaa
actgcagccaagaaaaggatcgatgaggatgattttgctgatgaagaattaggagatgat
ttgcttccagaataa

  All links  
Disease (1)   
   OMIM (1)   
Gene (13)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (100)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (97)   
DNA sequence (129)   
   RefSeq(nuc) (103)   
   GenBank (13)   
   EMBL (13)   
Protein domain (34)   
   Pfam (34)   
All databases (277)   

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