KEGG   Homo sapiens (human): 8178
Entry
8178              CDS       T01001                                 
Symbol
ELL, C19orf17, ELL1, MEN, PPP1R68
Name
(RefSeq) elongation factor for RNA polymerase II
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
hsa  Homo sapiens (human)
Pathway
hsa03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    8178 (ELL)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:hsa01009]
    8178 (ELL)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hsa03021]
    8178 (ELL)
Protein phosphatases and associated proteins [BR:hsa01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     8178 (ELL)
Transcription machinery [BR:hsa03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     8178 (ELL)
    Little elongation complex (LEC)
     8178 (ELL)
SSDB
Motif
Pfam: ELL Occludin_ELL DUF3450 DUF6185 RNA12 RNase_Y_N TMF_TATA_bd Seryl_tRNA_N EzrA
Other DBs
NCBI-GeneID: 8178
NCBI-ProteinID: NP_006523
OMIM: 600284
HGNC: 23114
Ensembl: ENSG00000105656
UniProt: P55199
Structure
Position
19:complement(18442663..18522070)
AA seq 621 aa
MAALKEDRSYGLSCGRVSDGSKVSVFHVKLTDSALRAFESYRARQDSVSLRPSIRFQGSQ
GHISIPQPDCPAEARTFSFYLSNIGRDNPQGSFDCIQQYVSSHGEVHLDCLGSIQDKITV
CATDDSYQKARQSMAQAEEETRSRSAIVIKAGGRYLGKKVQFRKPAPGATDAVPSRKRAT
PINLASAIRKSGASAVSGGSGVSQRPFRDRVLHLLALRPYRKAELLLRLQKDGLTQADKD
ALDGLLQQVANMSAKDGTCTLQDCMYKDVQKDWPGYSEGDQQLLKRVLVRKLCQPQSTGS
LLGDPAASSPPGERGRSASPPQKRLQPPDFIDPLANKKPRISHFTQRAQPAVNGKLGVPN
GREALLPTPGPPASTDTLSSSTHLPPRLEPPRAHDPLADVSNDLGHSGRDCEHGEAAAPA
PTVRLGLPLLTDCAQPSRPHGSPSRSKPKKKSKKHKDKERAAEDKPRAQLPDCAPATHAT
PGAPADTPGLNGTCSVSSVPTSTSETPDYLLKYAAISSSEQRQSYKNDFNAEYSEYRDLH
ARIERITRRFTQLDAQLRQLSQGSEEYETTRGQILQEYRKIKKTNTNYSQEKHRCEYLHS
KLAHIKRLIAEYDQRQLQAWP
NT seq 1866 nt   +upstreamnt  +downstreamnt
atggcggcgctgaaggaggataggagctacgggctgtcgtgcgggcgggttagcgacggc
agcaaggtgtcggtgttccacgtgaagctcaccgacagtgccctgagggccttcgagagc
taccgcgccagacaggattctgtttcactgaggccatctatccgatttcaaggaagccaa
gggcacatctccatcccccagcctgactgccccgcagaggcgcggacgttctccttctac
ctctccaacatcggccgcgacaacccccagggcagcttcgactgcatccagcagtatgtc
tccagtcatggggaagttcacctggactgcctgggcagcatacaggacaagatcacggtg
tgtgccaccgacgactcctaccagaaggcgcggcagagcatggcccaggcggaggaggag
acgcggagccgaagtgccattgtcatcaaggctggaggccgctacctgggcaagaaggtt
cagtttcggaaaccagccccaggtgcaacagacgcggtgccctcccggaagcgggcaacc
cccatcaacttggcgagtgccatcaggaagagtggtgccagtgccgtgagtgggggcagc
ggggtgtcccagaggcccttccgtgaccgagtgctgcacctcctggcactacggccctac
cgcaaggctgagctgctgctgcgactgcagaaggacggcctgacgcaggcggacaaggac
gcgctggatggcctcctccagcaggtggccaacatgagtgctaaggacggcacgtgtaca
ctgcaggactgcatgtacaaggatgtgcagaaggactggcctggctactcggagggggac
cagcagctgctgaagcgggtgctcgtccggaagctgtgccagccacagagcactggcagc
ctccttggagaccctgctgcctccagccccccaggcgagcgtgggcgctcggcctcgccc
ccacagaagcggctgcagcctcctgatttcatcgaccccctagccaacaagaaaccccgg
atatcgcacttcactcagagagctcagcctgccgtcaacgggaagctgggcgtgcccaat
ggccgtgaggccttgctgcccaccccgggcccaccagccagcacggacaccctcagctcc
agcactcacctgcccccgcggctggagcccccgagggcccacgaccccctggccgatgtc
agcaatgacctgggccacagcggccgagactgtgagcacggagaggcggctgccccagcc
cccactgtgcgcctcggcctgcccctgctgacggactgtgcccagcccagcaggccacac
ggcagcccctcgcgcagcaagcccaagaagaagtccaagaagcacaaagacaaggagagg
gcggctgaggacaagccccgggcccagcttccagactgtgcacctgccacccatgccacc
cccggagccccagcagacaccccaggtttaaacggaacctgcagcgtttccagtgttccc
acgtccacgtcggagacgcctgactacttgctgaagtacgcagccatctcctcttcggag
cagcgccagagctacaagaacgacttcaatgccgagtacagcgagtaccgcgacctgcac
gcccgcattgagcgcatcacgcggcggttcacccagctcgacgcccagctccggcagctc
tcccagggctccgaggagtatgagactactcgagggcagattttgcaggaatatcgaaaa
atcaaaaagaccaacaccaactacagccaggagaagcaccgctgcgagtacctgcacagc
aagctggcccacatcaagaggctcatcgccgagtacgaccagcggcagctgcaggcttgg
ccctag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (5)   
   OC (1)   
   PHAROS (1)   
Protein sequence (11)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (9)   
DNA sequence (35)   
   RefSeq(nuc) (9)   
   GenBank (13)   
   EMBL (13)   
3D Structure (1)   
   PDB (1)   
Protein domain (9)   
   Pfam (9)   
All databases (86)   

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