KEGG   Homo sapiens (human): 960Help
Entry
960               CDS       T01001                                 

Gene name
CD44, CDW44, CSPG8, ECMR-III, HCELL, HUTCH-I, IN, LHR, MC56, MDU2, MDU3, MIC4, Pgp1
Definition
(RefSeq) CD44 molecule (Indian blood group)
  KO
K06256  CD44 antigen
Organism
hsa  Homo sapiens (human)
Pathway
hsa04512  ECM-receptor interaction
hsa04640  Hematopoietic cell lineage
hsa05131  Shigellosis
hsa05169  Epstein-Barr virus infection
hsa05205  Proteoglycans in cancer
hsa05206  MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    960 (CD44)
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    960 (CD44)
 09160 Human Diseases
  09161 Cancers: Overview
   05206 MicroRNAs in cancer
    960 (CD44)
   05205 Proteoglycans in cancer
    960 (CD44)
  09171 Infectious diseases: Bacterial
   05131 Shigellosis
    960 (CD44)
  09172 Infectious diseases: Viral
   05169 Epstein-Barr virus infection
    960 (CD44)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hsa04147]
    960 (CD44)
   04090 CD molecules [BR:hsa04090]
    960 (CD44)
   00535 Proteoglycans [BR:hsa00535]
    960 (CD44)
   00536 Glycosaminoglycan binding proteins [BR:hsa00536]
    960 (CD44)
Exosome [BR:hsa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   960 (CD44)
  Exosomal proteins of other body fluids (saliva and urine)
   960 (CD44)
  Exosomal proteins of colorectal cancer cells
   960 (CD44)
  Exosomal proteins of bladder cancer cells
   960 (CD44)
CD molecules [BR:hsa04090]
 Proteins
  960 (CD44)
Proteoglycans [BR:hsa00535]
 Cell surface proteoglycans
  Others
   960 (CD44)
Glycosaminoglycan binding proteins [BR:hsa00536]
 Hyaluronan
  Cell surface receptors
   960 (CD44)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Xlink
Motif
Other DBs
NCBI-GeneID: 960
NCBI-ProteinID: NP_000601
OMIM: 107269
HGNC: 1681
Ensembl: ENSG00000026508
Vega: OTTHUMG00000044388
Pharos: P16070(Tbio)
UniProt: P16070
Structure
PDB: 

Position
11p13
AA seq 742 aa AA seqDB search
MDKFWWHAAWGLCLVPLSLAQIDLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTL
PTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSICAANNTGVYILTSNTSQYDTYCFN
ASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSS
GSSSERSSTSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATTLMSTSATATETATKRQE
TWDWFSWLFLPSESKNHLHTTTQMAGTSSNTISAGWEPNEENEDERDRHLSFSGSGIDDD
EDFISSTISTTPRAFDHTKQNQDWTQWNPSHSNPEVLLQTTTRMTDVDRNGTTAYEGNWN
PEAHPPLIHHEHHEEEETPHSTSTIQATPSSTTEETATQKEQWFGNRWHEGYRQTPKEDS
HSTTGTAAASAHTSHPMQGRTTPSPEDSSWTDFFNPISHPMGRGHQAGRRMDMDSSHSIT
LQPTANPNTGLVEDLDRTGPLSMTTQQSNSQSFSTSHEGLEEDKDHPTTSTLTSSNRNDV
TGGRRDPNHSEGSTTLLEGYTSHYPHTKESRTFIPVTSAKTGSFGVTAVTVGDSNSNVNR
SLSGDQDTFHPSGGSHTTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLAL
ALILAVCIAVNSRRRCGQKKKLVINSGNGAVEDRKPSGLNGEASKSQEMVHLVNKESSET
PDQFMTADETRNLQNVDMKIGV
NT seq 2229 nt NT seq  +upstreamnt  +downstreamnt
atggacaagttttggtggcacgcagcctggggactctgcctcgtgccgctgagcctggcg
cagatcgatttgaatataacctgccgctttgcaggtgtattccacgtggagaaaaatggt
cgctacagcatctctcggacggaggccgctgacctctgcaaggctttcaatagcaccttg
cccacaatggcccagatggagaaagctctgagcatcggatttgagacctgcaggtatggg
ttcatagaagggcacgtggtgattccccggatccaccccaactccatctgtgcagcaaac
aacacaggggtgtacatcctcacatccaacacctcccagtatgacacatattgcttcaat
gcttcagctccacctgaagaagattgtacatcagtcacagacctgcccaatgcctttgat
ggaccaattaccataactattgttaaccgtgatggcacccgctatgtccagaaaggagaa
tacagaacgaatcctgaagacatctaccccagcaaccctactgatgatgacgtgagcagc
ggctcctccagtgaaaggagcagcacttcaggaggttacatcttttacaccttttctact
gtacaccccatcccagacgaagacagtccctggatcaccgacagcacagacagaatccct
gctaccactttgatgagcactagtgctacagcaactgagacagcaaccaagaggcaagaa
acctgggattggttttcatggttgtttctaccatcagagtcaaagaatcatcttcacaca
acaacacaaatggctggtacgtcttcaaataccatctcagcaggctgggagccaaatgaa
gaaaatgaagatgaaagagacagacacctcagtttttctggatcaggcattgatgatgat
gaagattttatctccagcaccatttcaaccacaccacgggcttttgaccacacaaaacag
aaccaggactggacccagtggaacccaagccattcaaatccggaagtgctacttcagaca
accacaaggatgactgatgtagacagaaatggcaccactgcttatgaaggaaactggaac
ccagaagcacaccctcccctcattcaccatgagcatcatgaggaagaagagaccccacat
tctacaagcacaatccaggcaactcctagtagtacaacggaagaaacagctacccagaag
gaacagtggtttggcaacagatggcatgagggatatcgccaaacacccaaagaagactcc
cattcgacaacagggacagctgcagcctcagctcataccagccatccaatgcaaggaagg
acaacaccaagcccagaggacagttcctggactgatttcttcaacccaatctcacacccc
atgggacgaggtcatcaagcaggaagaaggatggatatggactccagtcatagtataacg
cttcagcctactgcaaatccaaacacaggtttggtggaagatttggacaggacaggacct
ctttcaatgacaacgcagcagagtaattctcagagcttctctacatcacatgaaggcttg
gaagaagataaagaccatccaacaacttctactctgacatcaagcaataggaatgatgtc
acaggtggaagaagagacccaaatcattctgaaggctcaactactttactggaaggttat
acctctcattacccacacacgaaggaaagcaggaccttcatcccagtgacctcagctaag
actgggtcctttggagttactgcagttactgttggagattccaactctaatgtcaatcgt
tccttatcaggagaccaagacacattccaccccagtggggggtcccataccactcatgga
tctgaatcagatggacactcacatgggagtcaagaaggtggagcaaacacaacctctggt
cctataaggacaccccaaattccagaatggctgatcatcttggcatccctcttggccttg
gctttgattcttgcagtttgcattgcagtcaacagtcgaagaaggtgtgggcagaagaaa
aagctagtgatcaacagtggcaatggagctgtggaggacagaaagccaagtggactcaac
ggagaggccagcaagtctcaggaaatggtgcatttggtgaacaaggagtcgtcagaaact
ccagaccagtttatgacagctgatgagacaaggaacctgcagaatgtggacatgaagatt
ggggtgtaa

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (6)   
   KEGG PATHWAY (6)   
Disease (2)   
   OMIM (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (43)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   UniGene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (16)   
   OC (1)   
   PHAROS (1)   
   VEGA (1)   
Protein sequence (29)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (27)   
DNA sequence (111)   
   RefSeq(nuc) (27)   
   GenBank (42)   
   EMBL (42)   
Protein domain (1)   
   Pfam (1)   
All databases (199)   

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