KEGG   Homo sapiens (human): 988
Entry
988               CDS       T01001                                 
Symbol
CDC5L, CDC5, CDC5-LIKE, CEF1, PCDC5RP, dJ319D22.1
Name
(RefSeq) cell division cycle 5 like
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
hsa  Homo sapiens (human)
Pathway
hsa03040  Spliceosome
Network
nt06547  Spliceosome
  Element
N01971  spliceosome activation
N01972  Spliceosome catalysis (branching)
N01993  Spliceosome catalysis (exon ligation)
N01994  Spliceosome disassembly
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    988 (CDC5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsa03041]
    988 (CDC5L)
   03400 DNA repair and recombination proteins [BR:hsa03400]
    988 (CDC5L)
Spliceosome [BR:hsa03041]
 Complex B
  Other components
   Prp19 complex
    988 (CDC5L)
 Complex C
   Prp19-CDC5 complex
    988 (CDC5L)
DNA repair and recombination proteins [BR:hsa03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    988 (CDC5L)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect Rap1_C C45G9_C
Other DBs
NCBI-GeneID: 988
NCBI-ProteinID: NP_001244
OMIM: 602868
HGNC: 1743
Ensembl: ENSG00000096401
UniProt: Q99459
Structure
Position
6:44387706..44450425
AA seq 802 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKAAQRDNEEETTDDP
RKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFR
KLRQQDLDGELRSEKEGRDRKKDKQHLKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAP
QISDAELQEVVKVGQASEIARQTAEESGITNSASSTLLSEYNVTNNSVALRTPRTPASQD
RILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSNGA
EGLTPRSGTTPKPVINSTPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGL
LGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEMKRMHKA
VQKDLPRPSEVNETILRPLNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKG
KTVGFGTNNSEHITYLEHNPYEKFSKEELKKAQDVLVQEMEVVKQGMSHGELSSEAYNQV
WEECYSQVLYLPGQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKIL
LGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKHEDSAIPRRLECLKEDVQRQQER
EKELQHRYADLLLEKETLKSKF
NT seq 2409 nt   +upstreamnt  +downstreamnt
atgcctcgaattatgatcaaggggggcgtatggaggaataccgaggatgaaattctgaaa
gcagcggtaatgaaatatgggaaaaatcagtggtctaggattgcctcattgctgcataga
aaatcagcaaagcagtgcaaagccagatggtatgaatggctggatccaagcattaagaag
acagaatggtccagagaagaagaggaaaaactcttgcacttggccaagttgatgccaact
cagtggaggaccattgctccaatcattggaagaacagcggcccagtgcttagaacactat
gaatttcttctggataaagctgcccaaagagacaatgaagaggaaacaacagatgatcca
cgaaaacttaaacctggagaaatagatccaaatccagaaacaaaaccagcgcggcctgat
ccaattgatatggatgaggatgaacttgagatgctttctgaagccagagcccgcttggct
aatactcagggaaagaaggccaagaggaaagcaagagagaaacaattggaagaagcaaga
cgtcttgctgccctccaaaaaagaagagaacttcgagcagctggcatagaaattcagaag
aaaagaaaaaggaagagaggagttgattataatgccgaaatcccatttgaaaaaaagcct
gcccttggtttttatgatacttctgaggaaaactaccaagctcttgacgcagatttcagg
aaattaagacaacaggatcttgatggggagctaagatctgaaaaagaaggaagagataga
aaaaaagacaaacagcatttgaaaaggaaaaaagaatctgatttaccatcagctattctt
caaactagtggtgtttctgaatttactaaaaagagaagcaaactagtacttcctgcccct
cagatttcagatgcagaactccaggaagttgtaaaagtaggccaagcgagtgaaattgca
cgtcaaactgccgaggaatctggcataacaaattctgcttccagtacacttttgtctgag
tacaatgtcaccaacaacagcgttgctcttagaacaccacgaacaccagcttcccaggac
agaattctgcaggaagcccagaacctcatggccctcaccaatgtggacaccccattgaaa
ggtggacttaataccccattgcatgagagtgacttctcaggtgtaactccacagcgacaa
gttgtacagactccaaacacagttctctctactccattcaggactccttctaatggagct
gaagggctgactccccggagtggaacaactcccaaaccagttattaactctactccgggt
agaactcctcttcgagacaagttaaacattaatcccgaggatggaatggcagactatagt
gatccctcttacgtgaagcagatggaaagagaatcccgagaacatctccgtttagggttg
ttgggccttcctgcccctaagaatgattttgaaattgttctaccagaaaatgccgagaag
gagctggaagaacgtgaaatagatgatacttacattgaagatgctgctgatgtggatgct
cgaaagcaggccatacgagatgcagagcgtgtaaaggaaatgaaacgaatgcataaagct
gtccagaaagatctgccaagaccatcagaagtaaatgaaactattctaagacccttaaat
gtagaaccgcctttaacagatttacagaaaagtgaagaactaatcaaaaaagaaatgatc
acaatgcttcattatgaccttctacatcacccttatgaaccatctggaaataaaaaaggc
aaaactgtagggtttggtaccaataattcagagcacattacctatctggaacataatcct
tatgaaaagttctccaaagaagagctgaaaaaggcccaggatgttttggtgcaggagatg
gaagtggttaaacaaggaatgagccatggagagctctcaagtgaagcttataaccaggtg
tgggaagaatgctacagtcaagttttatatcttcctgggcagagccgctacacacgggcc
aatctggctagtaaaaaggacagaattgaatcacttgaaaagaggctcgagataaacagg
ggtcacatgacgacagaagccaagagggctgcaaagatggaaaagaagatgaaaattttg
cttgggggttaccagtctcgtgctatggggctcatgaaacagttgaatgacttatgggac
caaattgaacaggctcacttggagttacgcacttttgaagaactcaagaaacatgaagat
tctgctattccccggaggctagagtgtctaaaagaagacgttcagcgacaacaagaaaga
gaaaaggaacttcaacatagatatgctgatttgctgctggagaaagagactttaaagtca
aaattctga

  All links  
Disease (1)   
   OMIM (1)   
Gene (22)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (5)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (23)   
   RefSeq(nuc) (3)   
   GenBank (10)   
   EMBL (10)   
3D Structure (36)   
   PDB (36)   
Protein domain (6)   
   Pfam (6)   
All databases (93)   

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