KEGG   Acetivibrio saccincola: HVS_00570
Entry
HVS_00570         CDS       T05223                                 
Symbol
hup1
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
hsc  Acetivibrio saccincola
Brite
KEGG Orthology (KO) [BR:hsc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hsc03032]
    HVS_00570 (hup1)
   03036 Chromosome and associated proteins [BR:hsc03036]
    HVS_00570 (hup1)
   03400 DNA repair and recombination proteins [BR:hsc03400]
    HVS_00570 (hup1)
DNA replication proteins [BR:hsc03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    HVS_00570 (hup1)
Chromosome and associated proteins [BR:hsc03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    HVS_00570 (hup1)
DNA repair and recombination proteins [BR:hsc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      HVS_00570 (hup1)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_1 HU-CCDC81_euk_2 Arm-DNA-bind_4 Peptidase_C80 DUF2335
Other DBs
NCBI-ProteinID: AUG56094
UniProt: A0A2K9E813
Position
108076..108351
AA seq 91 aa
MNKTELIASMAEKSQLSKKDAEKALNAFIASVEEGLARGEKIQLVGFGTFEVRQRAERKG
RNPQTKEEIIIPATKAPVFKVGKNLKDLVNQ
NT seq 276 nt   +upstreamnt  +downstreamnt
atgaacaaaactgaattaatagcaagtatggcagaaaagagtcagctatcaaagaaagat
gctgaaaaagccctcaatgcttttattgcaagtgttgaggaaggattggcaagaggtgaa
aaaattcagctagtgggctttggaacatttgaagtaaggcagagggcagaaagaaaaggc
agaaacccacagacaaaagaagaaataataattcctgcaactaaagcacctgtgtttaaa
gtaggaaaaaatttaaaggatttagtaaatcaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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