KEGG   Herbinix luporum: SD1D_0246
Entry
SD1D_0246         CDS       T04072                                 
Symbol
ddl
Name
(GenBank) D-alanine-D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
hsd  Herbinix luporum
Pathway
hsd00470  D-Amino acid metabolism
hsd00550  Peptidoglycan biosynthesis
hsd01100  Metabolic pathways
hsd01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:hsd00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    SD1D_0246 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    SD1D_0246 (ddl)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    SD1D_0246 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:hsd01011]
    SD1D_0246 (ddl)
Enzymes [BR:hsd01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     SD1D_0246 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:hsd01011]
 Precursor biosynthesis
  Amino acid ligase
   SD1D_0246 (ddl)
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N CPSase_L_D2 ATP-grasp_3 ATP-grasp_4 RimK GARS_A Toxin_31 GSP_synth
Other DBs
NCBI-ProteinID: CUH91799
UniProt: A0A0K8J363
Position
I:complement(251748..252779)
AA seq 343 aa
MKIVVLAGGTSPERDVSLSTGKMIYKALKNKGHQTILLDVYLGYEGDTSNLFDIEKDWAE
GIGNIGTYNPDIKEIKALRKGNPDHFFGPGVLEICDMADIVFLALHGENGEDGRIQAAFD
LMGIKYTGTDYASSTIAMDKAVSKELFTYYNIPSPKGIYVRKGEEYTWDSFPCVVKVNNG
GSSVGVSIVHSADEMDAAIDNALSYGDQLIIEQYIKGREFSVGVIDGKALPVIEIAPISG
FYDYKNKYQAGNAIETCPADLDEAISKQMQDFAVMVFKALRLKTYARMDFLLNDKNEIYC
LEANTLPGMTPTSLLPQEAKAIGIDFEDLCELIIDISLKKYNK
NT seq 1032 nt   +upstreamnt  +downstreamnt
atgaagatagtagtattagcagggggaaccagtcccgaacgagatgtatctctttctaca
ggaaagatgatttataaagctttaaaaaataagggacaccaaaccatactattagatgta
tatttaggttacgaaggagatacaagtaatctatttgatatagaaaaagactgggccgaa
ggaatcggcaatatcggtacctataatccagatataaaggaaattaaagccctaagaaaa
ggcaatccagatcacttcttcggaccgggggtactggaaatatgcgacatggcagatatc
gtatttttagcactccacggggaaaacggtgaagacggcagaatccaggctgcctttgac
ctaatgggtattaaatataccggtaccgattatgccagcagtaccattgctatggataag
gctgtctccaaagaactgtttacatattataatatccctagtcctaaaggtatctatgtt
agaaagggagaagaatatacttgggatagctttccttgcgttgttaaggtaaataatggt
ggttccagtgtaggtgtatccattgtgcattcagctgatgaaatggatgctgccattgat
aatgccctatcctatggggaccaacttattatagaacaatatattaaaggtagggagttt
tctgtaggagtaattgacggaaaggctttacctgttattgagattgcccctatttcaggt
ttttacgattataaaaataaatatcaggcaggcaatgccattgaaacatgtcctgctgac
cttgatgaggccatatcaaaacagatgcaggattttgcagtaatggtatttaaggctctt
cgcctaaaaacctatgcccgaatggactttttattaaatgataaaaatgaaatctactgc
ctagaagcaaatacccttcccggtatgacccctacatccttacttccccaagaggccaag
gctataggaatagattttgaagatttatgcgaattaataatagatatttccttgaaaaaa
tataataaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (40)   

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