KEGG   Herbinix luporum: SD1D_0504
Entry
SD1D_0504         CDS       T04072                                 
Symbol
aspS
Name
(GenBank) Aspartate-tRNA ligase
  KO
K01876  aspartyl-tRNA synthetase [EC:6.1.1.12]
Organism
hsd  Herbinix luporum
Pathway
hsd00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:hsd00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    SD1D_0504 (aspS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:hsd01007]
    SD1D_0504 (aspS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hsd03016]
    SD1D_0504 (aspS)
   03029 Mitochondrial biogenesis [BR:hsd03029]
    SD1D_0504 (aspS)
Enzymes [BR:hsd01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.12  aspartate---tRNA ligase
     SD1D_0504 (aspS)
Amino acid related enzymes [BR:hsd01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   SD1D_0504 (aspS)
Transfer RNA biogenesis [BR:hsd03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    SD1D_0504 (aspS)
 Prokaryotic type
   Other AARSs
    SD1D_0504 (aspS)
Mitochondrial biogenesis [BR:hsd03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    SD1D_0504 (aspS)
SSDB
Motif
Pfam: tRNA-synt_2 GAD tRNA_anti-codon tRNA-synt_2d
Other DBs
NCBI-ProteinID: CUH92056
UniProt: A0A0K8J343
Position
I:525069..526862
AA seq 597 aa
MAESMKGLRRSHRCTEVSNRNIGETVTVMGWVQKSRNKGGIIFVDLRDRSGILQIIFEES
DVGSEGFAKAEHLRSEYVIAVRGRVEARSGAVNKNLLTGDIEIRANDIRILSEAETPPFP
IEEDSKTKEELRLKYRYLDLRRPDLQRNLILRSRVANITRSFLTEEGFLEIETPTLTKST
PEGARDYLVPSRVHPGQFYALPQSPQLFKQLLMCAGYDRYFQIVKCYRDEDLRADRQPEF
TQIDMELSFVDVDDVIEVNERLLKKMFKEAIGIDVELPIQRMTYKEAMDRFGSDKPDIRF
GMELKDVSHIVKGCGFGVFTGAIENGGSVRGINAQGQATMPRKKIDAMVNFVKDYGAKGL
AYLAINEDGSYKSSFAKFMTEDELASLVKAMEAKPGDLLFFAADKDDIVYAALGNLRLEL
AKNMDLINKDEYKFLWVTEFPLLEYSEEEQRYVAKHHPFTMPMEEDLHLLDTDPGKVRAK
AYDIVLNGHEIGGGSVRIYQSDIQEKMFEVLGFTKEEAYERFGFLLNAFKFGVPPHAGLA
YGLDRLIMLMAKEDNIRDVIAFPKVKDASCLMTEAPSIVDNKQLIELGIDVKNNTDI
NT seq 1794 nt   +upstreamnt  +downstreamnt
atggcagaatcaatgaaaggtttacgcagaagtcaccgctgtactgaagtatccaatcgt
aatatcggagaaacagtgacagtaatgggatgggtacaaaaaagcagaaataagggtggt
ataatttttgttgacctaagagatcgttccggaattctgcagattatttttgaagaaagt
gatgtaggaagcgaaggctttgccaaggctgagcatttaagaagtgaatatgttattgca
gtaaggggtagggttgaggccagatccggagctgttaataaaaacttattaacaggagat
atagaaatcagggctaatgatataagaatcttgtcagaagccgagactcctccttttccc
atagaagaggatagtaagaccaaggaagagttaaggcttaagtatagatacctagatctt
cgtaggcctgatttacaaagaaatctgattcttcgaagccgggtggctaacattacacgg
agtttcttaactgaagaaggatttttagagatagaaactcctacactgacaaaaagtaca
ccggagggagcaagggactatctggttccaagcagagtacacccaggacaattctatgcc
ctgccccaatcacctcaattatttaaacagcttttaatgtgtgccggatatgacaggtat
tttcagattgtcaaatgttatcgtgacgaagatttaagggcagacaggcagcctgaattc
acccagattgatatggaattatcctttgtggatgtggatgatgttatagaagttaatgaa
cgactccttaagaaaatgtttaaagaagccataggtatagatgtagagcttcctatacaa
agaatgacctataaagaagcaatggacagatttggatcggataagccggatatccgtttt
ggcatggagcttaaggatgtgtcccatatagtaaaaggctgtggctttggagtatttacc
ggtgctatcgaaaatggcggatctgtcagaggtataaatgcccagggacaagctacaatg
ccaagaaaaaagatagatgccatggttaattttgttaaggattacggtgctaaaggcttg
gcctatcttgcaattaatgaagacggcagctataaatcctcctttgcaaaatttatgacc
gaggatgaacttgcctctttagtaaaggctatggaagcaaaaccgggtgatctattattc
tttgctgccgataaagatgacatagtatatgctgctctaggtaatctaagactggagctg
gcaaaaaatatggatctaataaataaggatgaatataaatttctatgggttacggagttt
cctttgttggagtactcagaagaagaacaaagatacgttgctaagcatcatccctttacc
atgcctatggaagaggatcttcacctacttgatacagaccctggcaaagttagggctaag
gcctatgatattgtattaaacggccacgaaatcggaggaggatccgtaagaatatatcaa
agcgacattcaagaaaagatgtttgaagtacttggatttaccaaggaagaagcttatgaa
cgttttggcttccttttaaatgcatttaaatttggtgtacctccccatgccggtttagca
tatggtcttgaccgtctgataatgcttatggctaaggaagacaatatccgtgatgttatt
gccttccctaaagtaaaagatgcatcctgtctaatgacagaggctcccagtattgtagat
aataaacagcttatagaattaggtattgatgttaaaaataatacagatatataa

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (47)   

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