KEGG   Herbaspirillum seropedicae SmR1: Hsero_0955
Entry
Hsero_0955        CDS       T01268                                 
Name
(GenBank) conserved hypothetical protein
  KO
K01999  branched-chain amino acid transport system substrate-binding protein
Organism
hse  Herbaspirillum seropedicae SmR1
Pathway
hse02010  ABC transporters
hse02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:hse00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    Hsero_0955
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Hsero_0955
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:hse02000]
    Hsero_0955
Transporters [BR:hse02000]
 ABC transporters, prokaryotic type
  Phosphate and amino acid transporters
   Branched-chain amino acid transporter
    Hsero_0955
SSDB
Motif
Pfam: Peripla_BP_6
Other DBs
NCBI-ProteinID: ADJ62472
UniProt: D8J0R7
Position
1046886..1048202
AA seq 438 aa
MLHSKILKAIALTTVLLTAGLQQARADEQFFPLQSYRVGPYAAGGTGFFGGFIDYLNLVN
LRDGGVGGVKLTWEEGETQYEVERGVEVYERLKQRPNIATWNPLSVGIAYALLDRVTADK
VPLLTINHGRTDTTDGRVFKYIFPLLLNPYSETSGIVNYIASKEGGADKLKGKKIVVLYH
GSPYGKETIPIYKLLSEKYGFSLQQIEVPHPGNDQQAQWLAIRRAKPDYVVLRGWGVMNP
VALKTAQKSGFPADRIIGNVWSNSEEDVIPAGDAAKGYVAITTVAAGAQYPVLQEIQKTV
YGAGKGNLQDPKRIGSVYHNLGVLNGILNVEAIRIAQARFGKRTLTGDEIRWGLENLNID
QARTAALGAKGLFHSIHVTWDNHEGDGLVAFQQWDGKQWHVVSDWIAPDWKLLRPIIEKS
ALAYAKEKNIKVRKSIDD
NT seq 1317 nt   +upstreamnt  +downstreamnt
atgctgcactcaaaaatactaaaagcgattgccctcaccacagtccttctgacggccggc
ctgcaacaggcgcgcgccgatgaacagttctttcccctgcagagttaccgcgtcggtccc
tatgccgccggcgggaccggtttcttcggcggtttcatcgattacctgaacctggtcaac
ctgcgcgatggcggcgtgggcggcgtcaagctgacctgggaagagggcgagacccagtac
gaagtggaacgcggcgtggaagtctacgagcgcctcaagcaacgccccaatatcgccacc
tggaatccgctctcggtcggcatcgcctatgccctgctggaccgcgtgaccgctgacaag
gtgccgctgctgaccatcaaccatggccgcaccgataccaccgatgggcgcgtgttcaag
tacatcttcccgctgctgctcaatccctacagcgagacctcgggcatcgtcaactacatc
gccagcaaggagggcggcgccgacaagctcaagggcaagaagatcgtggtgctctatcac
ggttcgccctatggcaaggaaaccatccccatctacaagctgctgtcagaaaaatacggc
ttctcgctgcaacagatcgaagtgccgcatcctggcaatgaccagcaggcgcaatggctg
gcgatccgccgcgccaagccggattacgtggtgctgcgcggctggggcgtgatgaatccg
gtggccttgaagacggcgcagaagtcgggcttcccggccgaccgcatcatcggcaacgtc
tggtccaattcggaagaagacgtgatcccggcaggggacgctgccaagggctatgtggcc
atcaccaccgtggcggcgggcgcacagtatccggtgctgcaggagatccagaagaccgtc
tatggcgccggcaagggtaatctgcaggaccccaagcgtatcggcagcgtctatcacaac
ctgggcgtgctcaacggcatcctcaatgtggaagcgatccgcatcgcccaggccaggttc
ggcaagcgtacgttgaccggtgacgaaatccgctggggcctggaaaacctcaatatcgac
caggcgcgcaccgcagcgctgggcgccaagggcctgttccattccatccatgtgacctgg
gacaaccacgaaggcgatggcctggtggccttccagcaatgggacggcaagcagtggcac
gtggtctcggactggatcgcgccggactggaagctgctgcgtcccatcatcgaaaagtcc
gccctggcctatgccaaggaaaagaacatcaaggtgcgcaagagcatcgatgactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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