KEGG   Herbaspirillum seropedicae SmR1: Hsero_1359
Entry
Hsero_1359        CDS       T01268                                 
Symbol
tolC
Name
(GenBank) outer membrane drug efflux lipoprotein
  KO
K18139  outer membrane protein, multidrug efflux system
Organism
hse  Herbaspirillum seropedicae SmR1
Pathway
hse01501  beta-Lactam resistance
hse02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:hse00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Hsero_1359 (tolC)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    Hsero_1359 (tolC)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:hse02000]
    Hsero_1359 (tolC)
   01504 Antimicrobial resistance genes [BR:hse01504]
    Hsero_1359 (tolC)
Transporters [BR:hse02000]
 Other transporters
  Pores ion channels [TC:1]
   Hsero_1359 (tolC)
Antimicrobial resistance genes [BR:hse01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    Hsero_1359 (tolC)
   Multidrug resistance, efflux pump MexJK-OprM [MD:M00642]
    Hsero_1359 (tolC)
   Multidrug resistance, efflux pump MexXY-OprM [MD:M00643]
    Hsero_1359 (tolC)
SSDB
Motif
Pfam: OEP
Other DBs
NCBI-ProteinID: ADJ62875
UniProt: D8IP55
Position
1549806..1551302
AA seq 498 aa
MKPSLSTRSPVLPMMLPVMLAMLLGGCTLMPDYHRPDAPVAAHFAGADSKNAAGASSAPV
VADIGWRDVFTDPSLQQVIALALENNRDLRVAVLNIEKARAQYGVQRAALFPSIKAATSE
TASRTPGDLSSTGSALTSRSYTATLGFSAYELDLFGRVRSLKEQALQSFLSTAEARRSTQ
ISLIAEVATAWLTLASDQDRLRLAQDTLESQSSSYALTQRSFELGSSSALTLRQAQTSVE
SARVDVESYTAQVDQDRNALVLLVGKDLPTALLPQGLPDTRLAAASPLATIPPGLPSDLL
QRRADIVQAERDLRAANANIGAARAAFYPSITLTVNAGTASARLAGLFKGGSGSWSFVPQ
ISLPIFDGGANQANLDIATVSRDISVAQYEKAIQTAFREVSDALAQRNTLGRQLQAQEAL
VQASDEAFRLSQARYHSGVDSYLTVLDSQRTLYSAQKNLIGTQLSRWTNLVTFYKTLGGG
WVERTGTPAASDIATQEP
NT seq 1497 nt   +upstreamnt  +downstreamnt
atgaagccttccctttctacccgttccccggtgctgcccatgatgttgccggtgatgctg
gccatgctgctgggtggctgcaccctgatgcctgactaccatcgtcccgacgccccggtg
gcggcgcactttgccggcgccgacagcaagaacgcagccggcgccagcagcgcgccagtg
gtggccgatatcggctggcgcgatgtcttcaccgatccttccttgcagcaggtcattgcg
ctggcgctggagaacaaccgtgacctgcgcgtggccgtgctcaacatcgagaaggcgcgc
gcccagtatggcgtgcagcgcgcggccctgttcccctccattaaggcggccaccagcgaa
acggccagtcgcacaccgggcgatctctccagcaccggcagcgccctgaccagccgcagc
tataccgctacgctgggcttcagcgcctacgagctggatctgttcggccgcgtgcgcagc
ctcaaggagcaggcgctgcaatccttcctctccactgccgaggcgcgccgcagtactcag
atcagtctgattgccgaagtggccaccgcctggctgaccctggcgtcggaccaggatcgc
ctgcgcctggcccaggacaccctggaaagccagagcagcagttacgcgctcacgcaacgc
agtttcgaactgggctcgtcctctgcactgaccctgcggcaggcccagaccagcgtggag
agcgcccgcgtggatgtggagagctataccgcccaggtcgaccaggaccgcaatgcgctg
gtgctgttggtgggcaaggacttgccgacagcgctgttgccgcagggcctgcccgatacg
cggctggctgcggccagcccgctggcgaccatcccaccgggactgccctcggacctgctg
caacggcgcgctgacatcgtgcaggccgaacgcgacctgcgcgcggccaatgccaacatc
ggcgcggcgcgcgcggccttctatcccagcatcaccctgaccgtcaatgccggtactgcc
agcgcccgtctggcgggcttgttcaaggggggatcgggatcgtggagcttcgtgccgcag
atttccctgcccatcttcgacggcggcgccaaccaggccaacctggatatcgccaccgtc
agccgcgacatctcggtggcgcaatacgagaaggccatccagaccgccttccgcgaagtc
tccgacgccctggcccagcgcaataccctgggccgccagctacaggcccaggaggcgctg
gtgcaggccagcgacgaggccttccgcttgtcgcaggcgcgctaccacagcggggtggac
agttacctcacggtgctggattcgcagcgcacgctgtactcggcgcagaagaacctgatc
ggcacccagctctcgcgctggaccaatctggtgaccttctacaagaccctcggtggcggc
tgggtggagcgtacgggaacgccggcggccagcgatattgccacgcaggagccgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (2)   
   KEGG MODULE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (20)   

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