KEGG   Herbaspirillum seropedicae SmR1: Hsero_1529
Entry
Hsero_1529        CDS       T01268                                 
Name
(GenBank) ABC-type dipeptide transport system, periplasmic component protein
  KO
K02035  peptide/nickel transport system substrate-binding protein
Organism
hse  Herbaspirillum seropedicae SmR1
Pathway
hse02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:hse00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Hsero_1529
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:hse02000]
    Hsero_1529
Transporters [BR:hse02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    Hsero_1529
SSDB
Motif
Pfam: SBP_bac_5
Other DBs
NCBI-ProteinID: ADJ63044
UniProt: D8IPZ8
Position
1759395..1761023
AA seq 542 aa
MVLASQPPSRKRRDLLLFTPLAATLSASPWHAALAHGDEAGHAHGDIAHAGKDMLTVVGP
WELTGLDPTRSGYMFARMEVLETLLEVDDAGQLQPSVASAWSVSADGLQWRFVLRSGLRY
HDGSALTPASILACLQRAQARPGVLRLADIAALRVEGQTLVVVLRRPFGPLPYLLTHYTT
QILAPASFDAQGNVVAIIGSGPFRIRSIALPQQFEVERVAGSVSGSGAGSDVGKVVQRAR
YISVSRAETRTLLVQSGQADLAFSLDPPSIRALQDSPRASLLSAMLPRTTLLKLNAGHPL
LADVRVRRAISLCIEREGIARALLRDPDLGATQLFPPSLARWHDAALAPLRTNLQQARSL
LDQAGWRPGSDGVRRRDGQRMALNLTTFVDRPELPLIATALQEEMRQIGMAVRVVIGNSS
DIPAGHRSGQLQMALAARNYGNLPDPVASLLQDFGPQGGDWGAMGWDNQEVPALLARLAA
TPADAAAKGNAERARIVALLQEQLPVIPVVWYRQTCAVSRRVRGASIDPFERSYRISSLQ
WT
NT seq 1629 nt   +upstreamnt  +downstreamnt
atggtcttggctagtcaaccaccttcgcgcaaacggcgcgatctgttgctcttcacgccg
ctggcggccacgctgtccgccagcccctggcacgcggcgctggcccatggggatgaggcc
ggtcatgcgcacggcgacatcgcacacgccggcaaggacatgctgaccgtggtggggccg
tgggagctgaccggactcgatcccacccgctcgggctacatgttcgcccgcatggaggtg
ctggaaaccttgctggaagtggacgatgccggccagctccagccctccgtggccagcgcc
tggagcgtcagcgccgacggtctgcaatggcgtttcgtcttgcgcagcgggctgcgctac
cacgacggctcggcgctcacgccggccagcatcctggcctgcctgcaacgggcgcaggcg
cgtccgggcgtgctgcgcctggccgatatcgccgccctccgtgtggaggggcagaccctg
gtggtcgtgctgcgccgtcccttcggtccgctgccttatctgctgacccattacaccacc
cagatcctggcgccggccagcttcgatgcgcagggcaatgtggtggccatcatcggcagc
ggccccttccgtatccgttccatcgccttgccgcagcagttcgaggtcgaacgggttgcg
ggcagcgtttctggcagcggggcgggcagcgatgtgggcaaggtggtccagcgtgcccgc
tacatcagcgtctcgcgtgcggagacgcgtacgttgctggtccagagcggccaggccgac
ctggccttctcgctggacccgcccagcatccgcgccctgcaggatagcccgcgcgccagc
ctgctctcggccatgctgccgcgtaccaccctcctcaagctcaatgccggccatccgctg
ctggccgatgtgcgggtgcgccgcgccatctccctgtgcatcgagcgcgagggcatcgcc
cgcgccttgctgcgcgatcccgacctgggcgctacgcaactctttccgccgtcgctggcg
cgctggcacgacgccgcactggcgcccttgcgcaccaacctgcagcaggcgcgcagcctg
ctggaccaggccggctggcggcctggcagtgatggcgtgcggcgtcgcgatggccagcgc
atggcgctgaacctgaccaccttcgtggatcgccctgagctgccgctcatcgccacggcc
ttgcaggaagagatgcgccagatcggcatggcggtgcgggtggtgatcggcaactccagc
gacatccccgccggccatcgcagcggccagttgcagatggcgctggccgcgcgcaactac
ggcaatctgcccgatccggtggccagcctcttgcaggactttggcccgcaaggcggcgac
tggggcgcgatgggctgggacaaccaggaagtgccggccctgctggcgcgccttgccgca
acgcccgctgacgccgccgccaagggcaacgccgagcgcgcacgcatcgtggcgctgctg
caagagcagttgccggtgatcccggtggtctggtatcgccagacctgcgccgtgagccgg
cgcgtacgcggcgccagcatcgatccctttgaacgcagttaccggatttcttcattgcaa
tggacctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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