KEGG   Herbaspirillum seropedicae SmR1: Hsero_3294
Entry
Hsero_3294        CDS       T01268                                 
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase protein
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
hse  Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:hse00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hse03016]
    Hsero_3294 (truA)
Enzymes [BR:hse01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     Hsero_3294 (truA)
Transfer RNA biogenesis [BR:hse03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    Hsero_3294 (truA)
 Prokaryotic type
    Hsero_3294 (truA)
SSDB
Motif
Pfam: PseudoU_synth_1 Med15
Other DBs
NCBI-ProteinID: ADJ64775
UniProt: D8J1Z2
Position
complement(3772548..3773450)
AA seq 300 aa
MTELDPQAEGLRRVVLGVQYDGASWQGWQTQPHRQTVQDQLEAALQRFSTQPIATTCAGR
TDSGVHALEQIVHFDTPIARDSFSWVRGTNAFLPPTIAVRWACELPYVDDAAIASAASQA
AELHGADRAGADSLSQFGFHARFSAIARTYHYVLYNHAVRTPLLAGKAGWTFRPLDADRM
HRAAQHLIGEHDFTSFRAVECQAKSPVRKMESIAVRRHGDMIVFTLKANAFLHHMVRNIV
GSLVVVGSGKQEPDWMGQVLALRDRSRAAPTFMPDGLYLARVDYPDAWALPQESRAWPWL
NT seq 903 nt   +upstreamnt  +downstreamnt
atgacagaactcgatccccaagccgaaggcctgcgccgcgtggtgctgggcgtgcaatac
gacggcgcttcttggcagggctggcagacccagccacaccggcagaccgtacaggatcag
ctggaagccgcgctgcagcgcttcagcacccagcccatcgccaccacctgtgcgggccgc
accgactccggcgtgcatgcgctggagcagatcgtccatttcgatacccccatcgcccgc
gacagcttttcctgggtgcgcggcaccaatgccttcctgccgcccaccattgccgtgcgc
tgggcctgcgaactgccctatgtggatgacgccgccatcgccagtgccgccagccaggcc
gctgagctgcatggggccgatcgcgcgggggcggacagcctgtcgcagttcggcttccat
gcgcgcttttcggccattgcccgtacctatcactacgtgctctacaaccacgccgtgcgc
acaccgctcttggccggcaaggccggctggaccttccgtccgctggacgccgaccgcatg
caccgcgccgcccagcacctcatcggcgagcatgatttcacgagctttcgcgccgtcgaa
tgccaggccaagtcgccagtgcgcaagatggaaagcatcgcggtgcgccgccatggcgac
atgattgtctttaccctcaaggccaatgccttcctgcatcacatggtgcgcaatatcgtc
ggctcgctggtggtggtcggcagcggcaagcaggagcccgactggatgggccaggtgctg
gccctgcgcgaccgcagccgcgccgcgccgaccttcatgcccgacgggctttacctggcg
cgggtagactatcccgatgcctgggcgctgccgcaggagagccgcgcctggccctggctg
taa

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