KEGG   Herbaspirillum seropedicae SmR1: Hsero_4739
Entry
Hsero_4739        CDS       T01268                                 
Symbol
dctD1
Name
(GenBank) two component transcription regulator protein
  KO
K07715  two-component system, NtrC family, response regulator GlrR
Organism
hse  Herbaspirillum seropedicae SmR1
Pathway
hse02020  Two-component system
hse02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:hse00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Hsero_4739 (dctD1)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Hsero_4739 (dctD1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:hse02022]
    Hsero_4739 (dctD1)
Two-component system [BR:hse02022]
 NtrC family
  GlrK-GlrR (amino sugar metabolism)
   Hsero_4739 (dctD1)
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 AAA HTH_8 AAA_16 AAA_2 TIP49
Other DBs
NCBI-ProteinID: ADJ66200
UniProt: D8IY78
Position
complement(5434673..5436073)
AA seq 466 aa
MELESPMGKTAPLMLVDDDPDLLRLLTLRLNASGYRILAVESAEAALAQLAISLPALVIT
DVRLPGMDGLALFAEIRSRYPALPVILLTAHGTIPDAVDATTQGAFAYLTKPFDGHVLLD
KVAQALSLAAPAPLSPDQSWRADILSRSQRVAELLAEARLVAASDASILIRGDSGTGKEL
LARAIHRASARAEQPFIAVNCGAIPEQLLESELFGHVKGAFTGAVEHREGLFQAAHGGTL
FLDEIGDMPLPLQVKLLRVLQEKTVRQVGANQAGEVDVRIISATHRDLEAAMREGQFRED
LYYRLNVVTLHLPALEERREDIALLANHFLKTIAAKYPKRLTGFAPDALEILSLAHWPGN
VRQLYNVVEQVCALSTAPLIPASLVQRALRTPTLDLLRYAEAKQKFERDYLIRLLKLTDG
NVSDAARLADRNRTEFYRLLQKNGLDPRRFRGGEEAVVAGRQEERL
NT seq 1401 nt   +upstreamnt  +downstreamnt
atggaactggagtccccgatgggaaagactgcccccctgatgctggtcgatgatgatccc
gacctgcttcgcctgttgacgctgcgcctcaatgccagcggctaccgcatcctggccgtg
gagagcgccgaggccgcgctggcgcagctggccatctcgctgccggcgctggtgatcacc
gatgtgcgcttgcccggcatggatgggctggccctgttcgccgagatccgcagccgctat
ccggccttgccggtgatccttcttaccgcgcatggcaccatccctgatgcagtggacgcc
accacccagggcgccttcgcctatctgaccaagcccttcgacggccatgtgctgctcgac
aaggtcgcccaggccctgagcctggcggcgccggcgccgctgtcgccggaccagtcgtgg
cgggccgacatcctcagccgcagccagcgggtggccgagctgctggccgaggcccggctg
gtggcggcctccgacgcgagcatcctgatccggggcgatagcggcaccggcaaggagctg
ctggcgcgcgccatccatcgcgccagtgcacgcgccgagcagcctttcatcgccgtcaat
tgcggcgccatccccgagcagttgctggagtccgagctgttcggccacgtcaagggcgca
ttcacgggcgcggtcgagcatcgcgaagggctgttccaggccgcccatggcggtaccttg
ttcctcgatgagatcggcgacatgcccctgcccctgcaggtcaagctcttgcgggtgttg
caggaaaaaacggtgcgccaggtcggcgccaaccaggctggcgaggtcgatgtgcgcatc
atctcagccacccatcgcgacctcgaagcggccatgcgcgaaggacagttccgcgaggat
ctgtattaccgcctcaatgtggtgacgctgcacctgccggcgctggaagagcggcgggag
gatatcgcgctgctggccaatcacttcctcaagaccattgcggccaagtatcccaagcgc
ctcaccgggtttgcccccgacgcgctggagatattgagcctggcgcactggccgggcaat
gtgcgccagctctataacgtggtggagcaggtctgcgccttgtccaccgcacccttgatc
ccggcgtccctggtgcagcgcgccctgcgcacgccgaccctcgatctgctgcgttatgcc
gaggccaagcagaagttcgagcgtgattacctgatccgcttgctcaagttgactgatggc
aacgtgtctgacgccgcccggctggctgatcgcaaccgtaccgagttctatcgcctgttg
cagaagaatggactggatccccggcgtttccgcggtggggaagaggctgtcgtcgcgggg
cgacaggaggaaaggctttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (25)   

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