KEGG   Halanaeroarchaeum sulfurireducens M27-SA2: HLASA_0580
Entry
HLASA_0580        CDS       T04261                                 
Symbol
tfb4
Name
(GenBank) transcription initiation factor TFB
  KO
K03124  transcription initiation factor TFIIB
Organism
hsf  Halanaeroarchaeum sulfurireducens M27-SA2
Pathway
hsf03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hsf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    HLASA_0580 (tfb4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hsf03021]
    HLASA_0580 (tfb4)
Transcription machinery [BR:hsf03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     HLASA_0580 (tfb4)
 Prokaryotic type
  Archaeal type
    TFB
     HLASA_0580 (tfb4)
SSDB
Motif
Pfam: TFIIB TF_Zn_Ribbon A2L_zn_ribbon Zn_Tnp_IS1595 zf-tcix zf-ribbon_3 YjdM_Zn_Ribbon OrfB_Zn_ribbon Zn-ribbon_8 Lar_restr_allev Sigma70_r4 Cyclin_C LysW-like_globular zf-C4_Topoisom DUF2310
Other DBs
NCBI-ProteinID: ALG81481
UniProt: A0A0N9N171
Position
complement(564081..565037)
AA seq 318 aa
MTRSTRQRERNTAEEETDEGVRECPECGSDNLVKSSDRAELVCDDCGLVVEEEKIDPGPE
WRAFNHQERQQKSRVGAPTTQTMHDKGLTTTIDWKDKDAYGRSISSKKRSQMHRLRKWQE
RIRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVIYRRALKEDLTRGRSIEGVATS
ALYAACRKEGIPRSLEEISEVSRVERKEIGRTYRYISQELGLEMKPVDPKKYVPRFCSEL
KLSEEVQSKANEIIETTAEKGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVADVAQVTE
VTIRNRYQEQIEAMGIHG
NT seq 957 nt   +upstreamnt  +downstreamnt
atgacacggtccactcgccagcgggagcgaaacactgctgaagaagagaccgacgagggg
gtgcgggagtgtccggagtgcgggtctgacaacctggtcaagagttcggaccgggcggaa
ctcgtctgtgacgactgcggcctcgtggtcgaggaggagaagatcgacccagggccggag
tggcgggcgttcaaccaccaggaacgccagcagaagtcacgtgtgggtgccccgacgacc
cagacgatgcacgacaaggggctgacgaccaccatcgactggaaggacaaggacgcctac
ggtcgctctatctcgtcgaagaagcgctcgcagatgcatcggctcagaaaatggcaggaa
cggatccgaacgaaagacgccggcgagcgcaacctccagttcgcgctctcagaaatcgat
cgaatggcgagtgcgctcggcgtcccgcgctccgtgcgggaggtcgcctcggtcatctac
cgtcgcgctctcaaagaggatctcacacggggacggtccatcgagggggtcgcgacctcc
gccctctacgcggcctgtcgaaaggagggcattccgcgaagtctcgaggagatctccgag
gtctcccgtgtcgaacgcaaggagatcgggcggacctatcgatatatctcacaggaactc
ggcctcgagatgaaaccggtcgatccgaagaagtacgtcccccgtttttgctccgaactc
aaactctccgaagaggtccagtcgaaagccaacgaaatcatcgagacgacggccgagaag
gggttgctctccgggaagtctccaactgggtacgcggccgccgccatctacgccgcatcg
cttctgtgcaacgagaagaagacccagcgcgaggtcgccgatgtcgcccaggtgaccgag
gtgacgattcggaaccggtatcaagagcagatcgaggcgatgggtatccacgggtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (23)   

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