KEGG   Halomonas aestuarii: BOX17_04970
Entry
BOX17_04970       CDS       T04554                                 
Name
(GenBank) exodeoxyribonuclease V subunit beta
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
hsi  Halomonas aestuarii
Pathway
hsi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hsi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BOX17_04970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hsi03400]
    BOX17_04970
Enzymes [BR:hsi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     BOX17_04970
DNA repair and recombination proteins [BR:hsi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BOX17_04970
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 AAA_11 T6SS_FHA_C
Other DBs
NCBI-ProteinID: APE30363
UniProt: A0A1J0VE98
Position
1112986..1117008
AA seq 1340 aa
MNSPDTARNNVESVHTAETPRLDPVALPLTGSRLIEASAGTGKTFTIALLYLRLVLGPRN
EEDAASFPRPLTPPEILVVTFTNAATQELRDRIRARLVEAAEAFSPQAPDDAPESGTDPD
SLASSDSHEGAPGADQSGGHSTGMSNVAPREGFTAPPRRPAAGSAPSQNETGDLFAEPSV
DNTEPEAELSPSSEPPGSDPLLALRDSYPRESWPTCARRLRLAAEWMDEAAVSTIHSWCH
RMLREHAFDSGSLFALEMSLDQSEMDLEIARDYWRSFYYDLDPEALAIVARYWTTPDALN
DTAARLRTHAAALPAAPPPFDALANYREQRAAALAELKAPWPAWLDELEALLEAAAQRKA
FNGQKLNAKSRANWLAALREWAHDPELASPDLTPAAWKRLTPDGITEIWKEEPAPNLPAL
EALEELPDKLAALPDPFADLLAHAVHWMAARRETVQRRRAELGPDDLLHRLDAAFAGEAG
ETLAARIREQFPVALVDEFQDTDPVQYRLFDRVYELEKNRDDSAVLLIGDPKQAIYAFRG
ADIHTYLQARRDTAGRHVTLGTNFRSAEPMVAAVNRVFEHAEQSDAGAFLFRRGDDNPVP
FSPVETNGRKDALTRNGATQPALTLWHLAADETLSKGAYLHELAGRCATEMASLLREGQA
GQTGFVKASGEEQGELRPLAPSDLAVLVNNAGEARAIRSALLARGIRSVYLSDKEGVFET
EAAAELEGWLAACAAPDDERCLRAALATPSLGLSLAELDALNGGPQQDELAWEARVMQFR
DYHRQWQRRGVLPMLHRLLADFAVPGRLLAVPEGERRLTDMLHLGELLQEASAEIDGEHA
LLRFLAESRAHPHAQSDTHRLRLESDADLVQVVTIHKSKGLEYPLVFLPFIAAFRPVKQG
DLPLRWHDDDGHLRLTLSADEATLARADRERLGEDLRKLYVALTRARHATWLGLAPLDAM
ERSAVGHLLKGGEELTPEALRPALEALADADGHERGRVTVIDAPEAEATPVELATDDTPL
GHARAPSRTIREHWWIASYSALRTGATPDEEAESAVQAEPAPEPTTADEATAMEVIDEPF
DAAASTVSEGSLHRFPRGPSAGTFLHGLLEWAGEEGFARVAQDAEMRADTLARRANRRGW
EGQIAALEQWLPELLTTPLPVPNSDDGEAAPLRLDALDGYRVELEFWFAAHRVNTRRLDA
LVSAHTLGGRPRPALEPDTLNGMLKGFIDLVVEHEGRFYVLDWKSNHLGADDAAYTEAAM
GEAVLEKRYDVQYCLYLLALHRLLAARLPDYNIERHLGGVLYVFLRGTRAPSRGVHAERP
PSELILALDTLFRAAEEAAA
NT seq 4023 nt   +upstreamnt  +downstreamnt
atgaactcgcccgataccgctcgaaataacgtggaaagcgtgcacacggccgagacgccg
cgcctcgacccggtggcgctgccgctcaccggcagccggctgatcgaggccagcgccggc
accggcaagaccttcaccatcgccctgctctacctgcgcctggtgctcggcccccggaac
gaggaggacgcggccagcttcccgcggccgctgacgccgccggagatcctggtggtgacc
ttcaccaacgccgccacccaggagctgcgcgaccgcatccgtgcccggctggtcgaagcg
gccgaggccttttctccacaggcgcccgacgacgcgcccgaatcggggacggaccccgat
tccttagcaagtagcgatagccacgaaggggcaccgggagcagatcaaagcggaggtcat
tcgacagggatgtcgaatgtagcgcccagggaggggttcacagcgcctccgcggcgacct
gccgccggatcagccccgtcccagaacgaaaccggagatctcttcgcagaaccttctgtg
gataacacagagcccgaagcagaactctcaccgagcagcgaaccgccgggcagcgatccg
ctgctcgccctgcgcgacagctacccccgcgagagctggccgacctgcgcccgccggctg
cggctggccgccgagtggatggacgaggccgcggtctccaccatccactcctggtgccac
cgcatgctgcgcgagcacgccttcgacagcggcagcctgttcgccctggagatgtcgctg
gaccagtccgagatggacctggagatcgcccgagactactggcgcagcttctactacgac
ctcgaccccgaggcgctggcgatcgtcgcccgctactggaccacgccggacgccctcaac
gacaccgccgcccggctgcgcacccacgccgccgccctgcccgccgcgccaccgcccttt
gatgcgctcgcgaactaccgcgagcagcgcgccgcggcgctcgccgagctcaaggcgccc
tggccggcctggctcgacgagctggaagccctgctcgaggcggccgcccagcgcaaggcc
ttcaacggccagaagctcaacgccaagagccgcgccaactggctcgccgccctgcgcgaa
tgggcccatgaccccgaactcgcgagccccgatctcactcccgccgcctggaagcgcctg
acgcccgacggcatcaccgagatctggaaggaagagccggccccgaacctgcccgcgctg
gaggcgctggaagagttgccggataagctcgccgcgctgcccgaccccttcgccgacctg
ctcgcccacgccgtgcactggatggccgcgcgccgggagaccgtgcagcgccgccgcgcc
gagctcggccccgacgacctgctgcaccggctcgacgccgccttcgcgggcgaggccggc
gagacgctcgccgctcgcatccgcgagcagttcccggtggcgctggtcgacgagttccag
gacaccgacccggtacagtaccgcctcttcgaccgggtctatgagctggagaagaaccgg
gacgacagcgccgtgctgctgatcggcgatcccaagcaggcgatctacgccttccgtggc
gccgatatccacacctacctccaggcccggcgcgacaccgccggccgccacgtcacgctc
ggcaccaacttccgctccgccgaacccatggtcgcggcggtcaaccgggtgttcgaacat
gccgagcagagcgacgccggcgccttcctgttccgccgcggcgacgacaatcccgtcccg
ttcagccctgtagagacgaacggtcgcaaggatgccctcacgcgaaacggcgccacacag
ccggcgctgaccctctggcacctggccgccgacgagacgctttccaagggcgcctacctc
cacgagctggccgggcgctgcgccaccgagatggccagcctcctgcgcgagggtcaggcc
gggcagacgggttttgtgaaggccagtggtgaagagcaaggagagctgcgcccgctggcg
ccgtcggatctcgcggtgctggtcaacaacgccggcgaggcccgcgccatccgaagcgcc
ctgctggcccgcggcatccgcagcgtctacctctccgacaaggagggcgtgttcgagacc
gaggccgccgccgagctggaggggtggctcgccgcctgcgccgcgccggacgacgaacgc
tgcctgcgcgccgcgctcgccacgccgagcctcgggctctcccttgccgagctcgacgcc
ctgaacggcggcccccagcaggacgagctggcctgggaggcgcgggtgatgcagttccgc
gactaccatcgccagtggcagcgccgcggcgtgctgcccatgctgcatcgactgctggcc
gacttcgcggtgcccgggcggctcttggcggtgcccgagggcgagcgacggctcaccgac
atgctgcacctcggcgagctcttgcaggaggccagcgccgagatcgacggcgagcacgcc
ctgctgcgcttcctcgccgaatcccgcgcgcatccgcacgcgcagtccgacacccaccgc
ctgcgcctggagagcgacgccgacctggtgcaggtggtgaccatccacaagtccaagggc
ctggagtacccgctggtgttcctgcccttcatcgccgccttccgcccggtgaagcagggc
gacctgccgctgcgctggcacgacgacgacggccacctgcgcctgacgctctccgccgac
gaggcgacgctcgcccgcgccgaccgcgagcgcctgggcgaggacctgcgcaagctctac
gtcgccctgacccgcgcccgccacgccacctggctcggcctggcgccgctggacgccatg
gagcgcagcgccgtcggccacctgctcaagggcggcgaggaactgacgcccgaggccctg
cgcccagccctcgaggcgctggcggacgcggatggtcacgagagaggtcgggtgacggtg
atcgacgctcccgaggccgaggccacgccggtcgaactcgccaccgacgacacgccgctc
ggccatgcccgcgcgcccagccggacgatccgcgagcactggtggatcgccagctactcg
gcgctgcgcaccggcgccaccccggatgaggaagctgaatccgccgtccaggccgagccg
gcccccgagcccaccaccgccgacgaggccacggcgatggaggtgatcgacgagcccttc
gacgcggcggcttccacggtgagcgagggctcgcttcaccgcttcccccgcggcccctcg
gcgggcaccttcctgcacggcctgctggagtgggccggcgaggagggcttcgcccgggtg
gcccaggacgccgagatgcgcgccgacaccctggcccggcgcgctaaccgccgcggctgg
gagggccagatcgccgccctcgaacagtggctgccggagctactgaccacgccgctgccg
gtgccgaattcggacgatggcgaggccgcgccgctgcgcctcgatgccctggacggctac
cgggtcgagctggagttctggttcgccgcccaccgggtgaacacccgccgactggacgcc
ctcgtaagcgctcacacactcggcggccggccgcggccggcgctcgagcccgataccctc
aacggcatgctcaagggcttcatcgacctggtggtggagcacgaggggcgcttctacgtg
ctcgactggaagtccaaccacctgggcgccgacgacgccgcctacaccgaggcggcgatg
ggtgaggccgtgctcgagaagcgctacgacgtgcagtactgcctctacctgctggccctg
caccggctgctcgcggcccggctgccggactacaacatcgagcgccacctgggcggggtg
ctctacgtcttcctgcgcggcacccgcgcgccctcccgcggcgtgcacgccgaacgcccg
ccgagcgagctgatcctcgcgctcgataccctgtttcgcgccgccgaggaggccgccgca
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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