KEGG   Histophilus somni 2336: HSM_0388
Entry
HSM_0388          CDS       T00673                                 
Name
(GenBank) NUDIX hydrolase
  KO
K08311  putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
hsm  Histophilus somni 2336
Pathway
hsm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hsm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HSM_0388
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsm03019]
    HSM_0388
Messenger RNA biogenesis [BR:hsm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     HSM_0388
SSDB
Motif
Pfam: NUDIX NUDIX_4
Other DBs
NCBI-ProteinID: ACA32027
UniProt: B0UWT4
Position
444543..445121
AA seq 192 aa
MIDFDGYRPNVGIVICNAERQVLWAKRYGQNSWQFPQGGINDNETAEQAMYRELYEEAGL
TPKDVEILYVSKHWLRYKLPKRLLRHDNRPICIGQKQRWFLLQLVSDEKRINMQHTKSPE
FDGWRWVSFWYPVRQVVTFKKDVYRKVMKEFALFLFDTNLKSRLSVPEEKKMFSSVKKKL
IHKKNHKYSSNQ
NT seq 579 nt   +upstreamnt  +downstreamnt
gtgatcgatttcgatggatatcgccctaatgtaggtatcgtgatctgcaatgcagaaagg
caggtgctttgggcgaaaagatatgggcaaaactcttggcagtttccacaaggtggcata
aatgacaatgaaactgctgagcaggcgatgtatcgtgaattatatgaagaagccggttta
acaccgaaagatgtcgagattttatatgtttcaaaacactggctacgctataaattacca
aaacgcttacttcgtcatgataaccgaccaatttgtatcggacaaaaacaacgttggttt
ttattgcaattggtttctgatgaaaaaagaatcaatatgcagcacacaaaatcaccggaa
tttgatggttggcgttgggtcagtttttggtatccggtgaggcaagttgtcacatttaaa
aaagatgtttaccgtaaggtaatgaaagagtttgcattgtttttatttgatacaaactta
aaatctcgattatctgtaccggaagaaaaaaaaatgttttcatcggttaagaaaaaactt
attcacaaaaaaaatcataaatattcttcaaatcagtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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