KEGG   Histophilus somni 2336: HSM_0406
Entry
HSM_0406          CDS       T00673                                 
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
hsm  Histophilus somni 2336
Brite
KEGG Orthology (KO) [BR:hsm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hsm03021]
    HSM_0406
Transcription machinery [BR:hsm03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     HSM_0406
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_23 Phage_antitermQ HTH_16 GerE
Other DBs
NCBI-ProteinID: ACA32048
Position
complement(471257..471832)
AA seq 191 aa
MAEQLTDQALVEKVQQGDKKAFNLLVARYQNKVAGLLTRYISQNDIPDVVQESFIKAYRS
IESFRGESAFYTWLYRIAVNTAKNYLTAQGRRPPTEDILAEDAESYNVGTNLRDVNTPEN
EILSGELKKVVFDTISNLQEDLKTAITLREMEGLSYEEIAEIMDCPVGTVRSRIFRAREI
IESKIQPLIQR
NT seq 576 nt   +upstreamnt  +downstreamnt
atggctgaacaactaacggatcaggctttggtagaaaaagtacagcagggagataaaaag
gcctttaacttattggttgctcgttatcaaaataaagttgctggattacttactcgttat
atttcacaaaacgatattcccgatgttgtacaagaatcctttataaaagcctaccgctca
attgaatcatttcgtggcgaaagtgctttttatacttggctatatcgaatagcggttaat
acggcaaagaattacttaacggcacaaggacggcgtccgccaacagaggatatattagca
gaagacgctgaaagttataatgttggtacaaatttaagggacgtgaatactcccgaaaat
gaaatattatccggtgaattgaaaaaagttgtttttgatactatcagtaacctgcaagaa
gatttaaaaacagctattacactacgtgaaatggaaggattgagttacgaagaaattgca
gaaattatggattgtccggtgggaaccgtacgttctcgtattttccgtgcaagagaaata
atcgaaagcaaaattcaacctttgatacaacgttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (14)   

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