KEGG   Herbaspirillum seropedicae Z67: ACP92_17030
Entry
ACP92_17030       CDS       T04519                                 
Name
(GenBank) type IV secretion protein Rhs
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
hsz  Herbaspirillum seropedicae Z67
Pathway
hsz03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hsz00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    ACP92_17030
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hsz02044]
    ACP92_17030
Secretion system [BR:hsz02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   ACP92_17030
SSDB
Motif
Pfam: Phage_GPD DUF2345 T6SS_Vgr Phage_base_V
Other DBs
NCBI-ProteinID: AKN66782
Position
3900589..3903063
AA seq 824 aa
MHSHTTRWDKLTRQRQHNRILQLFFINDDAPDAELLINRLEASEALSRDYVYTLELLSDD
AHIPLDAMMGKLLRVALTRADGTQRHFTGYVERFAFLRSDGGIAFYEARLVPWLAFLASR
HNNRIFHHLSLEGLSAAIFRAYPMHARWDCQLRHGDPVRTEMFQFDESDSNLLHRRWEDA
GWHYHYEHQADGHQLRLSDDSTYAKPIDGTGQVPFQRHGGAIEEDGMAQWSAVRQFQPSS
TRLSSYDFKAARPQEVEVPTLNKQGAVLQVEHYEYAGAYGFANRDDGDRQSRLRMEEFEA
AAQVFEGTGNCRFLQPGRTFRLTGHFSGSAASHDHDRDPELLIISVEHSATNNYLQDSET
PPFYANRVRCVRKRIPWRPGRSYYSQPTALLGIQTATVVGPAGENLHVDEYGRVKVQFHW
DQIGRNDERSSAWLRVASSWSGGEQGLVSVPRIGQLVIVQWLGGHPDRPIITGSVVNQLN
MPPWTLPSQSALSGMRSRELAPRTGNAPGGRSGHVLFDDTHEAIQTQVRSDAFDSQLALG
HITRIERHAGRQDARGEGFELRTDAHGVVRAAQGLLLTSEPRPKAHRHTTDIGETVARLT
QARGTVESLSKLAQEHEAQDKNADQYDAAQAIKAQNDAIKGDGAAKGGRFPELTEPHLVL
SSPSGIEASSGASTHLASAEHAALTAGSHISLAAGKSFFASAAEKLSLLAYRLGAKLIAA
SGRVEIQAQNDGMELLAQKVVDIISTRDWINLKAKKGIRLNGGGSELVIAEGITGFTQGA
HHVHAADHQTLGPQGRPAEFPGSRLCPARASGAAQSGSASVVLS
NT seq 2475 nt   +upstreamnt  +downstreamnt
atgcattcccatactacccgctgggacaagctcacccggcagcgccagcacaatcgcatc
ctgcaactcttcttcatcaatgacgacgcccccgacgccgaactgctgatcaatcggctc
gaggccagcgaggcccttagccgcgactacgtgtacacgctcgaactgctcagcgatgac
gcccacatcccgctggacgccatgatgggcaagctgctgcgtgtggcgctgacccgcgcg
gacggcacgcagcgccatttcaccggctatgtcgagcgctttgccttcctgcgcagcgat
ggcggcatcgccttctatgaggcccggctggtgccctggctagcgttcctggcttcacgc
cacaacaatcgcatcttccatcacctgagcctggaaggtctgagtgcagcgatctttcgt
gcctatcccatgcatgcccgatgggactgtcagctccgccatggtgatccggttcgcacc
gagatgtttcagttcgacgagagcgacagcaacctgttgcatcgccgctgggaggacgcg
ggctggcattaccactacgaacatcaggcggacggccatcaattgagactgtcggatgat
tcgacctatgccaaaccgatcgatggaacaggtcaagtccccttccagcgccatggcggc
gccatcgaggaagatggcatggcccaatggtctgcggtgcgccagttccaaccctccagc
acacgcctctccagctatgatttcaaggcggcgcggccacaagaggtggaagtaccgaca
ctgaacaagcaaggcgcggtactacaggtagaacattatgaatatgcaggcgcctacgga
ttcgccaatcgtgacgacggcgaccgccaaagtcgcctgcgcatggaggagttcgaggcc
gcggcgcaggtgttcgagggcacgggcaattgccgctttctccagccgggccggaccttc
cgcctgacaggacacttttcgggatcggcggcctcgcatgaccacgaccgggatccggaa
ttgctgatcatcagcgtggagcacagtgcgaccaacaattatctgcaggactcggaaaca
ccacctttctatgccaaccgcgtgcgctgcgtgcgcaaacgcatcccgtggcgtcctggt
cgcagctattacagtcagccgaccgccttgctcggcatacagaccgccaccgtcgtcggt
cccgccggagaaaacctccatgtggatgagtatggccgggtcaaggtgcagttccactgg
gaccagatcggccgcaacgatgaacgcagctcagcatggctgcgggtcgccagcagttgg
agtggtggcgagcagggccttgtgtccgtcccccggatcgggcaactggtgatcgtgcag
tggctaggcggccatccggatcgcccgatcattaccggctcggtggtgaatcagctcaac
atgccgccttggaccttgccttcccagtcggccttgtccggcatgcgcagccgcgaactg
gcgccccggacgggcaacgcacctggcggacgatccggccatgtgctcttcgacgacacc
catgaggccatccagacacaggtgcgcagcgatgccttcgacagccagctggcgctgggc
catatcacccgcatcgaacgccatgccggtcggcaggacgccaggggcgaaggcttcgag
ttacgcacggacgcccatggtgttgtccgtgccgcacagggcctattactcaccagcgag
ccgcggccaaaggcacatagacacaccaccgacataggtgaaaccgtcgcccgcctcaca
caggcgcgcggcaccgtggagagtctgagcaagctggcccaggaacacgaggcacaagac
aaaaatgccgatcagtacgatgctgcacaggcgatcaaagcacaaaacgatgctatcaaa
ggtgacggagccgccaagggcggtcgcttccctgagttgaccgaaccgcatctggttctc
tccagccctagcggcatcgaggccagttcaggcgcgtccacccacctggccagcgctgaa
catgccgccctcactgccggcagccacatttccttggctgccggcaaatccttctttgcc
agcgccgccgaaaaactgtcgctgctggcctatcggctcggcgccaagctcatcgcggcc
agcggacgggtcgagatccaggcgcagaacgatggcatggagctcctcgcgcaaaaggtg
gtggacatcatcagcacccgcgactggatcaatctcaaggccaagaaaggcatccgtctc
aatggagggggcagcgaactggtgattgccgagggcatcaccggctttacgcaaggcgcg
catcacgtccatgccgccgatcaccaaaccctgggcccgcagggcaggcccgccgaattc
cccggttcacggctctgccctgcgcgcgccagcggtgcggcgcagtccggcagcgccagt
gttgtgctgtcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (11)   

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