KEGG   Herbaspirillum seropedicae Z67: ACP92_23280
Entry
ACP92_23280       CDS       T04519                                 
Symbol
gatB
Name
(GenBank) glutamyl-tRNA amidotransferase
  KO
K02434  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Organism
hsz  Herbaspirillum seropedicae Z67
Pathway
hsz00970  Aminoacyl-tRNA biosynthesis
hsz01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:hsz00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    ACP92_23280 (gatB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:hsz03029]
    ACP92_23280 (gatB)
Enzymes [BR:hsz01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     ACP92_23280 (gatB)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     ACP92_23280 (gatB)
Mitochondrial biogenesis [BR:hsz03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    ACP92_23280 (gatB)
SSDB
Motif
Pfam: GatB_N GatB_Yqey
Other DBs
NCBI-ProteinID: AKN67882
Position
complement(5343382..5344842)
AA seq 486 aa
MQWEVVIGLETHTQLSTQSKIFSGSPTRFGAEPNTQASPVDLALPGVLPVLNKGAVERAI
QFGLAIGATIAPRSIFARKNYFYPDLPKGYQISQFEIPVVQGGTMSFAVEKDGKTEIKTI
NLTRAHLEEDAGKSLHEDYQGMTGIDLNRAGTPLLEIVTEPEMRSAAEAVGYAKALHSLV
MWLGICDGNMQEGSFRCDANVSVRPVGQEKFGTRCEIKNLNSFRFLEEAINYEVRRQIEL
IEDGGTVVQETRLYDPDKKETRSMRSKEDAQDYRYFPDPDLPPLAISQEWIERVKATMPE
LPAAMRERFVAEYALPEYDAMVLTQSKGMASYFEAVVAAAGKEQAKPAANWLMGDVASTL
NREDTDIADAPVKAAQLALLLKRIADGTISNKIAKEVFAGMWEARSDKDSLADDIIEAKG
LKQISDSGALEAIVDQVLAANEKSVAEFRAGKEQAINALIGQAMKATRGKANPAQLTELL
RKKLSS
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgcagtgggaagtcgtcatcggcctcgaaacgcacacgcagctttcgacccaatccaag
atcttcagcggcagcccgacccgcttcggcgccgaacccaacacccaggccagcccggtg
gacctggccttgccgggcgtgctgccggtcctcaacaagggcgctgtggaacgcgccatc
cagttcggcctggccatcggcgccaccatcgcgccgcgctcgatctttgcgcgcaagaac
tacttctatcctgacctgcccaagggctaccagatcagccagttcgagattccggtcgtg
caaggaggcaccatgtccttcgccgtcgagaaggatggcaagaccgagatcaagaccatc
aacctgacccgcgcccacctcgaagaagacgctggcaagtcgctgcacgaagactaccag
ggcatgaccggcatcgacctcaaccgcgccggcacgccgctgctggaaatcgtcaccgaa
cccgagatgcgcagcgccgccgaagccgtcggctacgccaaggccttgcactcgctggtg
atgtggctgggcatctgcgacggcaacatgcaggaaggctccttccgctgcgacgccaac
gtttccgtgcgtccggtcggccaggaaaaattcggcacccgttgcgagatcaagaacctg
aactccttccgcttcctcgaagaagccatcaactacgaagtgcgccgccagatcgaactg
atcgaagacggcggcaccgtcgtgcaggagacccgcctctacgatccggacaagaaggaa
acccgctccatgcgcagcaaggaagacgcgcaggactaccgttacttccccgaccccgac
ctgccgccgctggccatctcgcaggagtggatcgagcgcgtcaaggccaccatgcccgag
ttgcccgccgccatgcgcgagcgcttcgtggccgagtatgcgctgccggaatacgacgcc
atggtgctcacgcaatccaagggcatggcgtcctacttcgaagccgtggtcgcggcagcc
ggcaaggaacaagccaagccggccgccaactggctgatgggtgacgtcgcctccacgctc
aatcgcgaagacaccgacatcgctgacgcccccgtgaaggccgcgcaactggccctgctg
ttgaagcgcatcgccgatggcaccatctccaacaagatcgccaaggaagtcttcgccggc
atgtgggaagccaggtccgacaaggattccctggccgatgacatcatcgaagccaagggc
ttgaagcagatctccgacagcggcgcgctggaagccatcgtggaccaggtgctggccgcc
aatgaaaagtcggtcgccgaattccgcgccggcaaggagcaagccatcaacgccctgatc
ggccaggccatgaaggctacccgcggcaaggccaaccccgcgcaactgaccgaattgctg
cgcaagaagctgagcagctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (25)   

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