KEGG   Halorhabdus tiamatea: HTIA_0881
Entry
HTIA_0881         CDS       T02781                                 
Name
(GenBank) DNA mismatch repair protein, MutS family
  KO
K07456  DNA mismatch repair protein MutS2
Organism
hti  Halorhabdus tiamatea
Pathway
hti03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hti00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    HTIA_0881
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hti03400]
    HTIA_0881
DNA repair and recombination proteins [BR:hti03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     HTIA_0881
SSDB
Motif
Pfam: MutS_V HHH_5 HHH IMS_HHH AAA_29
Other DBs
NCBI-ProteinID: CCQ33021
UniProt: F7PJ55
Position
complement(842878..844863)
AA seq 661 aa
MDLTAIPGVGAKTADALAELEAPEAAIESGDVAAVARAPGISQGRAARIVRAAIRQRHDD
EGTFLATPRAREVYRDVLDLLADRTVTDYAAARLETFYPSASESRIDEVRALSERAMERD
PDDAVLAALEDVEPLEVPGDVRVRDRCLATTDGETYASAREAIPELSVEVVEDSRDLAEL
ARGYATVVALDDSFAGVDVEGDVRVEPDALAEPAAVVPERPLAFFAHNRDRILAAITVHR
AADLDAPCDLDVLEAALDRLDAEGTPTGDDELRRLQTAVDDLDAAVGEAESVANDRLREA
IEAQDVTIEGADLLSLVERGAGVDEVLSRELADEYDDAVEAAREHVIDTLDLRDVADIAR
RAFPDEPTFPVEREESVVSRLREELTTARDRRAERLKTELADDLASMREPAETLVDAALE
LDVELAIARFAADFDATMPELGGDGITIEGGRSPLLDVEFGDVEPVDYDVSGVRLLSGVN
SGGKTSMLDLIALTVILAHMGLPVPADRVHVGRIDALHYHAKTQGTLDAGAFESTLRSFG
ELVTDAASEGETLVLVDELESITEPGASAKIMAGILEALGARDQTAVFVSHLAREIRETA
DREIGVDGIQALGLEDGKLQVDRTPRKDTLARSTPELIVEKLADGNDGDAGFYADLLAKF
E
NT seq 1986 nt   +upstreamnt  +downstreamnt
atggatttgacggcgatccccggcgtcggcgcgaagactgccgacgctctcgccgagctc
gaggcccccgaagccgcgatcgaatcgggcgacgtcgccgccgtcgcgcgggctcccggc
atcagtcagggccgggccgcccggatcgtccgcgcggcgatcaggcagcgccacgacgac
gagggaaccttcctcgcgacgccgcgcgcccgggaagtgtaccgggacgtcctcgacctc
ctggcggaccgcaccgtcaccgactacgcggccgccagactggagacgttctatcccagc
gccagcgaatcccggatcgacgaggtccgtgctctgagtgaacgcgcgatggagcgcgac
cccgacgacgccgtcctcgccgcgctcgaagacgtcgaaccactcgaagtgccaggtgac
gtccgggtccgggaccggtgtctcgcgacgactgacggcgagacctatgccagcgcccgg
gaggcgatccccgagttgagcgtcgaagtcgtcgaggacagccgcgacctggcggaactc
gcccgcggctacgcgaccgtggtggcgctcgatgactccttcgccggcgtcgacgtcgag
ggtgacgtccgcgtcgaacccgacgcgctcgcggaaccggccgcagtcgtccccgaacgc
ccgctcgccttcttcgcccacaaccgcgaccgcatccttgccgcgatcaccgtccaccgg
gcggccgatctcgacgcaccctgtgatctcgacgtgctcgaagccgcgctggatcgactc
gacgcggaagggacgccgaccggcgacgacgaactccggcggcttcagacggctgtcgac
gacctcgatgccgccgtgggcgaggccgaatcggtcgctaacgaccgccttcgggaggcg
atcgaggcccaggacgtcaccatcgagggggcggacctgctctcgctcgtcgagcgcggc
gctggcgtcgacgaggtgctttcgagggaactggccgacgagtacgacgacgccgtcgaa
gcggcccgcgaacacgtcatcgacacactggatctccgggacgtcgctgacatcgcccgg
cgtgccttcccggacgagcctacgttccccgtcgagcgcgaggagagcgtcgtctcgcga
ctccgggaggaactcacgacggcccgcgaccggcgagccgagcgcctcaagaccgaactc
gccgacgacctggcgtcgatgcgcgagcccgcggagactctcgtcgatgccgccctggaa
ctggacgtcgaactcgcgatcgcccgcttcgctgccgatttcgacgcgacgatgcccgaa
ctcggcggcgacggaatcacgatcgagggcggccgctcgccgttgctcgacgtcgagttc
ggtgacgtcgagccggtcgactacgatgtctccggcgtcaggctcctctcgggggtcaac
agcggtgggaagacctccatgctggatctgatcgccctgaccgtgatcctcgcccacatg
ggtttgccggtgcccgcagaccgggtgcacgtcgggcggatcgacgccctgcactaccac
gccaagacccaggggacgctcgacgcgggggccttcgagagcacgctacgctcctttggc
gaactggtcaccgatgccgcgagcgagggcgagacgctcgtgctggtcgacgagttagag
agcatcaccgaacccggcgcgagcgcgaagatcatggccgggattctggaggcactcgga
gcacgcgaccagacggccgtgttcgtctctcacctcgcccgggagatccgggagacggcc
gatcgggaaatcggcgtcgacggcatccaggcgctcgggctcgaagacggcaagctacag
gtcgatcgaacaccgaggaaggacacgctggcccgctcgacaccggaacttatcgtcgag
aaacttgcggacggtaacgacggtgacgccgggttttacgccgatctgctcgcgaagttc
gagtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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