KEGG   Hydrogenophilus thermoluteolus: HPTL_0607
Entry
HPTL_0607         CDS       T05630                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
htl  Hydrogenophilus thermoluteolus
Pathway
htl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:htl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    HPTL_0607
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:htl03400]
    HPTL_0607
DNA repair and recombination proteins [BR:htl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HPTL_0607
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      HPTL_0607
SSDB
Motif
Pfam: ABC_tran UvrA_inter AAA_21 SMC_N nSTAND1 AAA_29 AAA_16 DnaJ_CXXCXGXG RsgA_GTPase AAA_23 DUF4350 nSTAND3 DUF6300
Other DBs
NCBI-ProteinID: BBD76875
UniProt: A0A2Z6DWV7
Position
complement(645624..648140)
AA seq 838 aa
MITIRGARTHNLKNISLTIPDNQITVITGVSGSGKSSLAFDTLFAEGQRRYLDALSLSAR
QWLDQLPRPDVDWISGLRPAIALTQQTLNASPRSTVGTMSEVLDALRLLFARLGTPHCPH
HPDEPLARHSLAEIRDTVLNRWEGARIALLVPKRALPNHLTTFEALRAAGYARLWHDQQT
VELESCFGPIPENAAVVIDRLKVRPEQSARLTDSLEHALTLGSGTALVCDLDQSATLRFD
THPTCPRCGFTAAELEPHHLSFNHPAGACPTCHGLGMIERAQPPQTAPADPPPADHTHLC
PDCLGTRLNPAARAVRFEGATLPELEALPLEALHSAVREWSAHYHTHPVAQPILQLIEVR
LRQMVALGLGYLTLARRTPTLSGGERQRVRLATQLSNALSGVLFVLDEPTSGLHPRDIRK
VLTALEQLRDAGNTVVVVEHDATTMHAADHLIEIGPGAGAHGGEVVYQGDYRGLTAANTP
TGHFLRKPIDLSAHRKPIAPEHPAVWHLGVRVHNLKGDPIAYPVGALIAVCGVSGAGKSS
LLFDALEPYVRAVLDNHPRDPVWGRLMLGTCAAPPSSDATSDGPLPWQRIITVDQQPIGH
NARSTPATFTGIMTALRECFAQTPEARARGYTASRFSYNVRGGRCEVCQGEGWRKIEMQF
LPPVIEPCPACHGARYNRETLEIRYRGVTISEALTLSAQDALKLFDNHPQIRRVLTTLVQ
LGLGYLPLGQPAPTLSGGEAQRLKLARELAKPAPSPTLYLLDEPTTGLHFADIEKLLTAL
FLLRDAGHTLIAAEHDPDFLRHADWLIELGPEGGPNGGHCCVQMPGRDQTIDETTTKQ
NT seq 2517 nt   +upstreamnt  +downstreamnt
atgatcaccattcgcggtgctcgcacccacaacctcaaaaatatctccctcacgattccc
gacaaccagataacggtgatcaccggcgtatccggttccgggaaatcatccctggcgttc
gataccctctttgccgaggggcagcggcgttacctcgatgccctttcgctttccgccaga
cagtggctcgaccaactgccacggcccgacgtcgactggatcagcggattacgcccagcg
atcgccctgacgcaacagaccctcaacgcttccccccgttcgacggtcggcacgatgagc
gaggtgcttgacgcgttgcgtttgctgttcgcgcggctgggaacgccgcactgcccccac
catcccgacgaacccctggcccgtcattcgctggccgaaatccgggataccgtactgaac
cgctgggaaggagcgcggattgcgctgctggttccgaaacgcgcgcttcccaaccacctc
accacctttgaggcattgcgcgctgctggttacgcacgtctctggcatgaccagcaaacg
gtcgagctcgaatcgtgcttcggccccatccccgaaaacgcggcggtggtgatcgaccgt
ctgaaagttcgccccgagcagagcgcgcggctcactgacagcctggaacacgctttgacg
ctcggttccggaaccgcgctggtttgtgacctcgaccagagcgcaacgctacgcttcgat
acccaccccacctgtccgcggtgcggtttcactgcggccgaactcgagccacaccatttg
tcgttcaatcaccccgcaggtgcctgccccacgtgtcatggcctaggcatgatcgagcgc
gcccagccaccccaaacggcaccagccgaccccccaccagcggaccacacccacctgtgc
cccgattgtcttggtacccgtctcaaccccgccgctcgcgcggtccgattcgagggcgca
accttaccggaactcgaagcgctgcctctcgaagcgttgcattctgccgttcgcgaatgg
tcagcgcactaccacacccatccggttgcgcaaccgatccttcagttgatcgaggtgcgc
ctccgacagatggttgcgttggggttgggctacctgactttggcccgacgcacccccacc
ctttccgggggcgaacggcagcgggtgcgactcgccacccaactgagtaacgcgctttcg
ggcgtgctcttcgtcctcgacgaacccacgagcggactccatccgcgggacatccggaaa
gtgctcaccgcgctcgagcagttacgcgacgcgggcaataccgttgtcgtcgtcgaacac
gacgcaacgacgatgcacgctgccgaccacctgatcgaaatcggtccgggtgccggagca
cacggcggagaagtggtctatcaaggcgattatcgcggtctcaccgccgcgaacaccccc
acgggccactttctgcgcaaaccgatcgatctctccgcgcaccgcaaaccgatcgcgcca
gagcaccccgccgtgtggcatctcggcgtccgcgtgcacaatctcaaaggcgaccccatc
gcctacccggtaggcgccctgatcgctgtgtgcggagtttccggcgcgggaaaatcgtca
ctgcttttcgacgcgctcgaaccctacgttcgcgccgtactcgacaaccatccccgcgat
cctgtatggggccgactcatgctcggcacctgtgccgcaccgcccagttccgacgcgacg
agcgatggaccactgccttggcagcgcatcatcaccgtcgaccagcagcccatcgggcac
aacgcgcgttccacccccgcgacattcaccggcatcatgaccgcgctgcgcgaatgcttt
gcgcagacaccagaagcacgcgcccgcgggtataccgcaagtcgattttcctacaacgtc
cggggtggacggtgcgaagtgtgtcagggcgaagggtggcgaaaaatcgagatgcagttc
cttccaccggtgatcgaaccctgcccagcatgccacggtgctcgctataaccgcgaaacc
ttggaaattcgctaccggggggtgacgatcagcgaggcgctcacgctttcggcacaagac
gcgctgaagcttttcgacaaccatcctcagatccgccgggtcttgacgacgctcgtccag
ctggggctcggttacctcccgttggggcagccggcacccaccctttccggcggcgaagcg
caacggctcaaattggcgcgcgaactcgctaaacccgccccctcaccgacgctctacctc
ctggacgaacccaccacggggctgcatttcgccgatatcgaaaaactgctcaccgcactc
tttctgttgcgcgacgcgggacacacgctgatcgctgccgaacacgaccccgattttttg
cgccacgccgactggctgatcgagctggggccagaagggggaccgaatggcgggcattgt
tgcgtccagatgccaggacgagaccaaaccattgacgaaacaacgacaaagcaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (21)   

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