KEGG T05808: EPV75

Hydrogenovibrio thermophilus: EPV75_08485

Entry

EPV75_08485       CDS       T05808

Symbol

rnd

Name

(GenBank) ribonuclease D

K03684

ribonuclease D [EC:3.1.13.5]

Organism

htr Hydrogenovibrio thermophilus

Brite

KEGG Orthology (KO) [BR:htr00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:htr03016]
    EPV75_08485 (rnd)
Enzymes [BR:htr01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     EPV75_08485 (rnd)
Transfer RNA biogenesis [BR:htr03016]
Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    EPV75_08485 (rnd)

SSDB

Motif

Pfam:

DNA_pol_A_exo1 HRDC DUF6042

Other DBs

NCBI-ProteinID:

QAB15700

UniProt:

A0A410H4G0

Position

1804820..1805968

AA seq 382 aa
MTYTFIDTQADLSAFCKLIEADGWFAIDTEFVRTDTYFPKLCLIQIQSRSGHAAIIDPMA
FDALEPLWQLLENPNIRKVFHSARQDIEVLYQVSGRMPEAIYDTQIAGVFLGFGDLAGLA
KVIKAELDIELEKDQTRTDWSRRPLTDKQLEYAINDVRYLAPLYERYLDKLTEAQQAALT
EDFEALLNEDLYRLAPENAADKIKAVQKLPRKAQAIAYRLAEWRELYAINHNKPKRWVLS
DDALVAIAKRPPKAREALYKVPNIKSSSVKNFGDEWIEIIDEVFANPDAWPETANKPAPA
TPQEDIFINIGFALLQQVAQDYHINPPNIAGKTDLLHLIRHPDNTLSGWRHALFGQPFTD
FLNSKGGLAVEDNRLIQKTFIP

NT seq 1149 nt +upstreamnt +downstreamnt
atgacctatacatttattgatacccaggcggatttatcggctttctgcaagcttatcgaa
gccgacggctggttcgccatcgacacggaattcgtgcgtaccgatacctatttcccgaaa
ctgtgcttgattcaaatccaaagccgttccggtcacgccgccatcatcgacccgatggca
ttcgacgcactcgaaccgttgtggcaattactggagaacccgaacatccgaaaggtcttc
cactccgcccgtcaggacatcgaagtattgtatcaagtttccggccggatgccggaggcg
atttacgacacccaaatcgccggtgtttttctcggattcggcgacctggcaggcctggcc
aaagtcattaaagccgaactcgatatcgaactggaaaaagaccagacccgaaccgattgg
agccgacgcccactgaccgataagcaactggaatacgccatcaacgacgtgcgttatctg
gccccgttatacgagcgctatctcgacaagctcaccgaggcgcaacaagcggccttaacc
gaagacttcgaagccctgttgaatgaggacctctaccgcctcgccccggaaaacgccgcc
gacaaaatcaaagcggtgcaaaaactgccgcgcaaagcccaggccatcgcctaccgttta
gccgaatggcgcgaactctacgccatcaatcataacaaacccaaacgttgggtgctgtcc
gacgatgcgctcgtcgccattgccaaacgcccaccgaaagcacgcgaagctctgtataaa
gtgccgaacatcaagtcgtcttcggtgaaaaatttcggtgacgaatggattgaaatcatc
gatgaggtgtttgccaatccggacgcctggcctgaaacggccaacaaaccggctccagcc
acgccccaagaagatattttcatcaatattggttttgcgttattgcaacaagtggctcag
gattaccacattaacccaccgaatattgccggaaaaacggatttgctccacctgattcgc
catccggacaacaccctttccgggtggcgtcacgccttatttggtcagccatttaccgac
tttttaaacagcaaaggcggcttggccgttgaggataaccgcctcattcaaaaaactttc
atcccataa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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