KEGG   Helicobacter typhlonius: BN2458_PEG0291
Entry
BN2458_PEG0291    CDS       T04174                                 
Name
(GenBank) DNA-directed RNA polymerase omega subunit
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
hty  Helicobacter typhlonius
Pathway
hty03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:hty00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BN2458_PEG0291
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hty03021]
    BN2458_PEG0291
   03400 DNA repair and recombination proteins [BR:hty03400]
    BN2458_PEG0291
Enzymes [BR:hty01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BN2458_PEG0291
Transcription machinery [BR:hty03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BN2458_PEG0291
DNA repair and recombination proteins [BR:hty03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BN2458_PEG0291
SSDB
Motif
Pfam: RNA_pol_Rpb6 DUF5937 SprA-related
Other DBs
NCBI-ProteinID: CUU39178
UniProt: A0A099UDY4
Position
I:244275..244499
AA seq 74 aa
MDTLRTEEIAAKALKRVNDDRYVLASLIFERVKELGEGAKPLIDADVKKDKLPDIAMREI
AEGKIELTSIEDKE
NT seq 225 nt   +upstreamnt  +downstreamnt
atggatacattacggacagaagaaattgctgcaaaagcactaaagcgcgtaaatgatgat
agatatgtgcttgcaagtctcatatttgagcgtgtgaaagaattgggagagggtgcaaaa
cctcttatagatgcagatgtaaaaaaggacaagttaccagatattgctatgcgcgagatt
gccgagggtaagatagagcttacctctattgaggataaagaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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