KEGG   Helicobacter typhlonius: BN2458_PEG0426
Entry
BN2458_PEG0426    CDS       T04174                                 
Name
(GenBank) tRNA pseudouridine 13 synthase
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
hty  Helicobacter typhlonius
Brite
KEGG Orthology (KO) [BR:hty00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hty03016]
    BN2458_PEG0426
Enzymes [BR:hty01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     BN2458_PEG0426
Transfer RNA biogenesis [BR:hty03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    BN2458_PEG0426
 Prokaryotic type
    BN2458_PEG0426
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: CUU39312
UniProt: A0A0S4PVB3
Position
I:365907..367076
AA seq 389 aa
MSRLYPFSHSPIECHFNPSPRDFVVKEIPLYEPSGSGEHCLVYVRKKGLSTFELLNLLSQ
VLGCKVRDIGYAGLKDKSAMTYQYISIHRSLRPKLESAAVFLEQKQVKILNIAYHHNKLK
VGHLKGNHFFMRLKKCLSLSATKIESVLASLSQSGFPNYFGDQRFGKDGNNFQSGRALAH
KKEHIKNKKMSNFLISSYQSHLFNEWLNARINLSQILHHFSVSEAQKALQDSKIPAFRAL
AQECSAQVLGDLQNQKQHFILLNGDIMCHYPFGKAFICEEPSSESTRFIQRDIAPTGALC
GTKLTYAQGLSALCENLYIDTQIKASGSRRYAWVWAEDIQSEYIAQKAHFELCFSLPKGS
YATIFLESLLNRPLVQELAQDSQDEMSNV
NT seq 1170 nt   +upstreamnt  +downstreamnt
atgtcgcgtctctatccctttagccacagcccgattgagtgccatttcaacccttcaccg
cgcgattttgtggtaaaagaaatccccctgtatgagccaagtgggagcggggaacattgt
ctcgtgtatgtgcgaaaaaagggtttgagcacatttgagcttttgaacttactttcgcaa
gtgttagggtgtaaggtgcgcgatattggctacgcagggcttaaagataaatccgcaatg
acttaccaatatataagtattcatcgctctttgcgtccaaaattagaatctgccgcagtg
tttttggagcaaaagcaagtgaagattctaaacattgcctatcatcacaataagcttaaa
gtcgggcatttgaagggtaatcacttctttatgagactgaaaaaatgtctctcgcttagt
gcgacaaaaatagaatctgtccttgcctccctttcccaaagtggttttccaaactatttt
ggagaccagcgatttggtaaagatggcaataattttcaaagcggtagggcattagcgcac
aaaaaggagcatattaagaataaaaaaatgagtaattttctcatctcaagctatcaaagc
catctgtttaatgaatggttgaatgcgcgtattaatctctctcaaatcttgcatcacttt
agcgtgagtgaggcacaaaaagcattgcaagattctaaaatccccgcatttagggcatta
gcacaagaatgtagcgcacaggtgctaggagatttacagaatcaaaagcaacattttata
cttcttaatggtgatattatgtgccattatccctttggtaaagcttttatatgcgaggag
ccaagcagtgaatctacgcgctttatacaaagagatattgctcccacaggcgcactctgt
ggcactaaacttacctacgcgcaaggtctttccgctctatgtgaaaatctctatatcgac
acgcagataaaggcgagcggctcgaggcggtatgcgtgggtgtgggcggaggatatacag
agtgaatatatcgcgcaaaaggcacattttgagctatgttttagtctgccaaaggggagt
tatgcgactatttttttagaatctcttcttaatcgcccactcgtgcaggagttggcacaa
gattcacaagatgaaatgagtaatgtttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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