KEGG T05558: DVJ78

Humibacter sp. BT305: DVJ78_16015

Entry

DVJ78_16015       CDS       T05558

Name

(GenBank) tRNA pseudouridine(38-40) synthase TruA

K06173

tRNA pseudouridine38-40 synthase [EC:5.4.99.12]

Organism

hum Humibacter sp. BT305

Brite

KEGG Orthology (KO) [BR:hum00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hum03016]
    DVJ78_16015
Enzymes [BR:hum01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     DVJ78_16015
Transfer RNA biogenesis [BR:hum03016]
Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    DVJ78_16015
Prokaryotic type
    DVJ78_16015

SSDB

Motif

Pfam:

PseudoU_synth_1

Other DBs

NCBI-ProteinID:

AXH37413

Position

complement(3373050..3373907)

AA seq 285 aa
MRVRLDIAYEGTDFSGWARQPTLRTVQGVLESVLARLFRRHEPAPLLTVAGRTDAGVHAS
GQVAHVDLTADQLGSLRRRHDADASPDALASKLAARMNGVLGADSDVVVLGSTRAPAGFD
ARFSAVWRRYEFRVADADTPRDPLERRRTVRHPTRLDVEAMDSAARALLGLHDYATFCKP
REGATTIRTLQEYGWHRDDRGVLIARLQADAFCHSMVRALVGAAVAVGDGSLTGERLVEL
RDDRMRTSAFLVMPAKGLTLTEVGYPAVDELARRAEQTRARRELD

NT seq 858 nt +upstreamnt +downstreamnt
atgcgcgtgaggctcgacatcgcgtacgaggggaccgacttcagcgggtgggccaggcag
cccacgctccgtaccgtgcagggtgtgctcgagtcggtgctggccaggctgttccggcgg
cacgagccggccccgctgctcacggtggcggggcggacggatgcgggtgtgcacgcgagc
gggcaggtggcccatgtggacctcaccgccgaccagctcggcagcctccgtcgacgccac
gacgccgacgcgagcccggacgcgctggcgtcgaagctcgccgcgcggatgaacggcgtg
ctcggagccgactccgacgttgtcgtcctcgggagcaccagggccccggcggggttcgac
gcgcggttctccgcggtctggcgccgctacgagttccgggtggcggatgcggacacccct
cgcgacccgctggagcggcgccgcacggtgcggcatcccacccgcctcgacgtggaggcg
atggacagcgccgcgcgggccctcctcgggctccacgactacgcgacgttctgcaagccg
cgcgagggggccacgaccatccgcacgctccaggagtacggctggcatcgcgacgaccgg
ggtgtgctgatcgcccgcctccaggccgacgcgttctgccacagcatggtgcgggcgctc
gtcggagcggcggtggccgtcggcgacggctcgctgacgggggagcggctcgtcgagctc
cgcgacgaccggatgcgcaccagtgcgttcctcgtgatgcccgcgaaggggctcacgctc
acggaggtcggatacccggcggtggacgagctggcccgccgcgccgagcagacgcgagcg
cggcgcgagctcgactga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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