KEGG   Humibacter ginsenosidimutans: FPZ11_06200
Entry
FPZ11_06200       CDS       T06119                                 
Name
(GenBank) exodeoxyribonuclease VII large subunit
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
huw  Humibacter ginsenosidimutans
Pathway
huw03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:huw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    FPZ11_06200
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:huw03400]
    FPZ11_06200
Enzymes [BR:huw01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     FPZ11_06200
DNA repair and recombination proteins [BR:huw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     FPZ11_06200
SSDB
Motif
Pfam: Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon 2_5_RNA_ligase2 Peptidase_S66
Other DBs
NCBI-ProteinID: QDZ14408
UniProt: A0A5B8M0R1
Position
1304278..1305573
AA seq 431 aa
MSLTGLSLGSALRRELSVPDALPTAETPWPVAILAGKLRDYIDRLGSVWVEGEITQWGVS
GGNVYGKLKDLEAEATISFTIWSSTRAKIPADLKQGDRVVALIKPNYWFKGGTLTMQVYD
MRHVGLGDLLERLERLRTQLRQEGLFEASRKKVLPFLPHCIGLVTGKDSDAEKDVLRNAQ
LRWPAVRFRVRHAAVQGDRAAGDVAAGIRELDLDPEVDVIIVARGGGDFQNLLPFSDEAL
VRTAAACSTPLVSAIGHENDRPLLDDVADLRASTPTDAAKRVVPDVAEELLRVQQASTRM
SVRVTALLNHEVDRIAQLRSRPVLSSHGWIVESRAEELTRYVARGAELMERCVERAENAT
RELVVRLRALSPQSTLDRGYAIAHGPNGLVRGPDDAPEGSALVLTLAEGRLGARSTGIPS
PEQADAGLSPA
NT seq 1296 nt   +upstreamnt  +downstreamnt
gtgtcactcacaggcctcagtctaggttcagcgctacggagggaactgagcgtgccggat
gccctgcccacggccgagacgccgtggccggtcgccattctggccggcaagctccgtgac
tacatcgaccgtctcggcagcgtctgggtcgagggcgagatcacccagtggggcgtctcc
ggcggcaatgtatacggcaagctcaaggacctcgaggccgaggccaccatctccttcacc
atctggtcgtcgacgcgcgccaagatccccgccgacctgaagcagggcgacagggtggtg
gccctgatcaagccgaactactggttcaagggcggcacgctcaccatgcaggtctacgac
atgcgccacgtgggcctcggcgatcttctcgaacgactcgaacggctgcgtacccaactg
cgccaagaaggcctcttcgaggcgagccgcaagaaggtgctgccgtttctcccgcactgc
atcggacttgtcacaggcaaggactccgacgcggagaaggatgtgctgcgcaacgcgcag
ctgcgttggccggccgtgcgattccgtgtgaggcatgccgcggtgcagggcgacagggct
gcgggcgatgtggccgcgggcatccgcgagctcgacctcgatcccgaggtcgacgtcatc
atcgtcgcccgcggcggcggcgacttccagaacctgctgccgttcagcgacgaggcactg
gtgcgcaccgcagcggcgtgctcgacgccgctggtcagcgcgatcggccacgagaacgac
aggccgctgctcgacgatgtcgccgatctgcgggcatccacccccaccgatgccgccaag
cgggtcgtgcccgacgtcgcggaagagctgctgcgcgttcagcaggcatccacgcgcatg
agcgtgcgggtcacggcgctgctgaaccacgaggtcgaccgcatcgcccagctgcgctcg
cgtcccgtgctgtcatcgcacgggtggatcgtcgaatcgcgtgccgaggagctcacgcgc
tacgtcgcccgcggggccgagctcatggaacgctgcgtcgagagagcggagaacgccacc
cgcgagctggttgtgcgactgcgcgccctgtccccgcagagcacgctcgaccgcgggtac
gccatcgcgcacgggccgaacggtctggtgcgcggcccggacgatgcgccggagggctcg
gcgctcgtgctgacgctcgccgagggcaggctcggcgcccgttcgacgggcatcccgtcc
ccggagcaggccgacgccggactctccccagcctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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