KEGG   Haloquadratum walsbyi DSM 16790: HQ_3410A
Entry
HQ_3410A          CDS       T00375                                 
Symbol
tbpB
Name
(GenBank) TATA-binding transcription initiation factor
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
hwa  Haloquadratum walsbyi DSM 16790
Pathway
hwa03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hwa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    HQ_3410A (tbpB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hwa03000]
    HQ_3410A (tbpB)
   03021 Transcription machinery [BR:hwa03021]
    HQ_3410A (tbpB)
Transcription factors [BR:hwa03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    HQ_3410A (tbpB)
Transcription machinery [BR:hwa03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     HQ_3410A (tbpB)
  RNA polymerase III system
    TFIIIB
     HQ_3410A (tbpB)
  RNA polymerase I system
    SL1/TIF-1B
     HQ_3410A (tbpB)
SSDB
Motif
Pfam: TBP T4bSS_IcmS DUF3378
Other DBs
NCBI-ProteinID: CAJ53507
UniProt: Q18EW0
Position
2776154..2776714
AA seq 186 aa
MTDPKDTINIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQKPKSAALIFR
SGKIVCTGAKSTTDVRESLHIVFDKLRDLRIPVSDNPDITVQNIVTSADLGEDLNLNAIA
IGLGLENIEYEPEQFPGLVYRLDNPAVVALLFGSGKLVITGGKEPDDAREAVDVILSRLD
ELGLAG
NT seq 561 nt   +upstreamnt  +downstreamnt
atgactgatccgaaggatacaatcaatattgaaaacgttgttgcctcgacgggaatcggg
caagaacttgatcttcagagtgtggcaatggatcttgagggggcagattatgacccagaa
cagtttccaggattagtctatcgaacacaaaagccgaagtctgctgctcttatttttcga
tctgggaagattgtctgcaccggggcaaagtcaactactgacgtccgtgaaagtctccat
attgtgtttgacaaacttcgtgacctccggattcctgtctccgacaatccagacatcacc
gtacaaaacattgtgacatctgcagatcttggagaagatttgaatcttaatgcaatcgct
attggacttggattagagaatattgaatatgagccagaacagtttcccgggcttgtatac
cgacttgataacccagctgttgtggcattattattcggatcgggaaaactcgtgattacg
ggcggaaaagagcctgatgatgcacgtgaggctgttgatgttattctctcccgattggac
gaactcggtttagctggttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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