KEGG   Halopiger xanaduensis: Halxa_3284
Entry
Halxa_3284        CDS       T01532                                 
Name
(GenBank) Transcription initiation factor IIB
  KO
K03124  transcription initiation factor TFIIB
Organism
hxa  Halopiger xanaduensis
Pathway
hxa03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hxa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Halxa_3284
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hxa03021]
    Halxa_3284
Transcription machinery [BR:hxa03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     Halxa_3284
 Prokaryotic type
  Archaeal type
    TFB
     Halxa_3284
SSDB
Motif
Pfam: TFIIB TF_Zn_Ribbon OrfB_Zn_ribbon DZR Sigma70_r4 DNA_ligase_ZBD Trm112p YopD HTH_Tnp_ISL3
Other DBs
NCBI-ProteinID: AEH37896
UniProt: F8D7G9
Position
complement(2615986..2616963)
AA seq 325 aa
MTDTSIRTRSDEQRQGTQEESHEQAGEREQCPECGGRLVSDAEHAETVCDDCGLVVDEGE
IDRGPEWRAFDAAEKDEKSRVGAPTTNMMHDQGLSTNIGWQDKDAYGRSLSSRQRQKMQR
LRTWNERFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALEEDLLPGRSI
EGVSTASLYAAARQAGTPRSLDEIDAVSRVEKDEIARTYRYVIRELGLEVQPADPESYVP
RFASDLDLPDETERRARQLLKTAKDSGIHSGKSPVGLAAAAVYAGALLTNEKVTQNDVSE
VANISEVTIRNRYHELLEAEEAAPA
NT seq 978 nt   +upstreamnt  +downstreamnt
atgactgacaccagtattcgaactcgcagcgacgagcaacgccagggcacccaggaggag
tcgcacgagcaggcgggcgaacgggaacagtgtccggagtgtggcggtcgactcgtctcg
gacgccgagcacgccgaaacggtctgcgacgattgcggtctcgtcgtcgacgaaggcgaa
atcgaccgcgggcccgagtggcgggccttcgacgccgccgagaaggacgagaagtcccgc
gtcggcgccccgacgaccaacatgatgcacgatcaggggctctcgaccaacatcggctgg
caggacaaggacgcctacggccgctccctctcgagccgccagcgccagaagatgcagcgc
cttcgcacctggaacgagcggttccgcacccgcgactccaaggagcgcaacttaaagcag
gcgctgggcgaaatcgaccggatggcctccgcgctcggcctccccgagaacgtccgcgaa
acggccagcgtgatctaccgccgcgccctcgaggaggacctccttcccggacggtcgatc
gaaggcgtctcgacggcctcgctgtacgccgccgcccggcaggccggcaccccgcgcagc
ttagacgagatcgacgcggtctcccgcgtcgagaaggacgagatcgcccgcacctaccgc
tacgtcatccgggaactgggcctcgaggtccagccggccgaccccgagagctacgtgccc
cgcttcgcgagcgatctcgacctccccgacgagaccgagcgccgcgcccgacagctgctc
aagacggccaaggactcgggcattcacagcggcaagtcgccggtcggcctcgcggccgcc
gcggtctacgccggcgcgctcctgacgaacgaaaaggtcacgcagaacgacgtcagcgag
gtcgcgaacatctccgaagtgacgatccgcaaccggtaccacgaactcctcgaggccgag
gaagccgcaccggcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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