KEGG   Hydrogenophaga sp. PAMC20947: E5678_20430
Entry
E5678_20430       CDS       T05960                                 
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
hyc  Hydrogenophaga sp. PAMC20947
Pathway
hyc00300  Lysine biosynthesis
hyc00550  Peptidoglycan biosynthesis
hyc01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:hyc00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    E5678_20430
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    E5678_20430
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:hyc01011]
    E5678_20430
Enzymes [BR:hyc01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     E5678_20430
Peptidoglycan biosynthesis and degradation proteins [BR:hyc01011]
 Precursor biosynthesis
  Amino acid ligase
   E5678_20430
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase
Other DBs
NCBI-ProteinID: QCB48180
UniProt: A0A4P7RCV2
Position
4482117..4483640
AA seq 507 aa
MNTPVAVAQWLRERVTGALVCDSRLVATGDGFVAWPGAATDGRRFVRSALEAGATVAVVE
RAGVEAFDFDDARVIAVPDLKAQAGAIASAFHSDPSASLAVVAITGTNGKTSTAWWVAQL
LSAAHTPCAVVGTLGIGRPPLAGESGHALVPTGLTTPDPVLLQSRLRSMRDSGLEACAIE
ASSIGLVEGRLNATRIRVAVFTNFTQDHLDFHGSMPAYWAAKASLFDRPELAAAVINLDD
ARSADLLTGLQGRPVDTWTVSVGGPARLSAQGLTHTKDGMRFTIEECDRQGAVCAQATLR
LSLVGKYNVSNVLCGLATLRALGVALDDAVKACASLTPVPGRMERAGEVQTGQPMVLVDY
AHTPDALEKALQALQPITAERGGSLWVVVGCGGDRDAGKRPLMAAVAEREAQRVVLTSDN
PRSEDPARILAQMVQGVLDAGEAMVEVDRAVAIAVAIKAADARDVVLIAGKGHEDYQDIQ
GVKTPFSDLGHASAALKLRPQMAGAQA
NT seq 1524 nt   +upstreamnt  +downstreamnt
atgaatacgcctgtggcggtcgcgcagtggttgcgcgagcgcgtaacgggggcgctggtg
tgcgacagccgcctggtggcgacgggcgatggttttgtggcctggcccggcgctgcgacc
gatggtcgtcgctttgtgcgttcggcgctggaggccggagccacagttgccgtggtggag
cgcgccggcgtcgaggcattcgatttcgacgatgcgcgggtcatcgcggtgcccgatctc
aaggcccaggccggcgccatcgccagcgccttccacagcgatccgagcgcatcgctggcc
gtggtggctatcacgggaaccaatggcaaaacctccacggcctggtgggtcgcgcagttg
ctgtcggccgcacacacgccctgcgctgtggtcggaaccctgggcatcggccgtcctccc
ctggcgggtgagtccggccatgccctcgtgcccaccggcctcaccacacccgacccggtg
ctgctccagtcgcgtctgcgcagcatgcgcgacagcggcctggaagcctgcgccattgag
gcttcttccattggtttggtcgaagggcgcctcaacgcgacacgcatccgtgtcgcggtg
ttcaccaatttcacccaggaccacctggactttcacggcagcatgcctgcctactgggcg
gccaaggccagcctgttcgatcgcccggagctggcggcagcggtgatcaatctggacgat
gccaggagtgcagatttgttgaccggcctgcaaggccggcccgtcgacacgtggacggtg
agcgtgggcggccccgcgcgcctgtcggcccaagggctgacccacaccaaggacggcatg
cggttcaccattgaagagtgtgaccgccagggcgccgtgtgcgcgcaagccactttgcgt
ctttcgctggtggggaagtacaacgtcagcaatgtgttgtgtggtcttgccaccttgcgc
gctttgggtgttgcgctggatgacgctgtgaaggcctgcgcgtccctgacgccggtgccg
ggtcgcatggagcgggcgggagaggtgcagactggtcagccgatggtgctggtggactat
gcccacacgcccgatgccctggagaaagctttgcaagccctgcaacccatcaccgcagag
cgggggggctcattgtgggtcgtggttggttgcggtggtgatcgggatgcgggcaagcga
cccctgatggccgcggtggccgagcgggaggcccagcgtgtggtgctgaccagcgacaac
ccgcgcagcgaagatccggctcggattctggcgcagatggtgcagggcgttctggacgcc
ggcgaggcgatggttgaagtggatcgcgctgtcgcgatcgcagtggccatcaaggcagcc
gacgctcgggatgtggtgttgattgcgggcaagggccatgaggactaccaggatatccag
ggtgtgaagaccccgttttcggatctgggccacgcaagcgccgccttgaagctgcgaccg
cagatggcgggagcacaggcatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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