KEGG   Hymenobacter sp. DG25A: AM218_01430
Entry
AM218_01430       CDS       T04064                                 
Name
(GenBank) ATP-dependent DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
hye  Hymenobacter sp. DG25A
Pathway
hye03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hye00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    AM218_01430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hye03400]
    AM218_01430
Enzymes [BR:hye01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AM218_01430
DNA repair and recombination proteins [BR:hye03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AM218_01430
    RecFOR pathway proteins
     AM218_01430
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 AAA_16 AAA_3 AAA_22 Mg_chelatase Bac_DnaA nSTAND3 NB-ARC AAA_14 AAA_PrkA Rad17 RNA_helicase AAA_33 NTPase_1 AAA_18 DUF815 bpMoxR TsaE AAA_24 NACHT Sigma54_activ_2 ABC_tran Torsin
Other DBs
NCBI-ProteinID: ALD20138
UniProt: A0A0M4HNG6
Position
330190..331236
AA seq 348 aa
MRESYLTGGADNMDATEKDIDKALRPLSFADFAGQDKVVENLKVFVGAAKQRGEALDHVL
LHGPPGLGKTTLSHIISNELGSGIKMTSGPVLDKPSDLAGLLTNLEPHDVLFIDEIHRLN
PVVEEYLYSAMEDYRIDIMLDSGPNARSVQISLSPFTLIGATTRSGLLTSPLRARFGINS
RLEYYDAKLLTSIVQRSAEILNTPIHEDAAYEIARRSRGTPRIANNLLRRTRDFAQMKGD
GTITQAIAHFALGALDVDARGLDDMDKRILLTIIDKFKGGPVGLSTIATACGDEAETIEE
VYEPFLIQEGYIKRTPRGREATEAAYQHLGRTMPQHLRGNTATGELFS
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgcgtgaatcttatctgaccggcggcgccgacaatatggacgccaccgaaaaagacatt
gataaagccctgcggcccttaagtttcgctgacttcgcgggccaggataaggtggtggaa
aacctgaaggtattcgtgggcgcggccaagcagcgcggcgaggccctcgaccacgtgctg
ctgcacgggcctcccggtctgggcaaaaccaccctctcgcacatcatctccaacgagctg
ggctccggcatcaaaatgaccagtggcccggtactggacaagccctccgacctggccggc
ctgctcaccaacctggagccgcacgacgtgctgttcatcgacgaaattcaccgcctgaac
cctgtggtggaagagtacctgtactcggccatggaggactaccgcatcgacatcatgctc
gattcgggcccgaatgcgcgctccgtgcagatttcgttgtcgccgttcacgctcatcggg
gctaccacccgttccggtctgctaacctcgccgctgcgggcgcgttttggcatcaactcc
cgtttggagtactacgatgccaagctgcttactagcattgtgcagcgctcggccgaaatc
ctgaacacgcccattcatgaggatgcggcctacgaaattgcgcgccgctcgcgcggtacc
ccgcgtattgccaacaacctgctgcgccgcacccgcgactttgcccagatgaaaggcgac
ggcaccatcacgcaggccattgcccacttcgccctcggcgcgctggacgtagacgcccgc
ggcctcgacgacatggacaagcgcatccttctcaccatcatcgacaagttcaagggtggc
cccgtaggcctgagcactattgccaccgcctgcggcgacgaagccgaaaccattgaggaa
gtgtacgagcccttccttattcaggaaggctacatcaagcgcacgccccgcggccgcgaa
gccaccgaagccgcctatcagcacctgggccgcaccatgccgcagcatctgcgcggcaat
acggccacgggcgagctatttagctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (28)   
   Pfam (28)   
All databases (38)   

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