KEGG   Hymenobacter sp. DG25A: AM218_09575
Entry
AM218_09575       CDS       T04064                                 
Name
(GenBank) hypothetical protein
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
hye  Hymenobacter sp. DG25A
Brite
KEGG Orthology (KO) [BR:hye00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hye03400]
    AM218_09575
DNA repair and recombination proteins [BR:hye03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AM218_09575
    Archaeal homologous recombinant proteins
     AM218_09575
SSDB
Motif
Pfam: SbcC_Walker_B AAA_23 SMC_N AAA_29 AAA_21 ABC_tran cobW AAA_15 AAA_22 ABC_membrane_3 nSTAND3
Other DBs
NCBI-ProteinID: ALD21422
UniProt: A0A0M5JSC0
Position
2232248..2235679
AA seq 1143 aa
MKILRVRFYNLNSLRGEHTVDFSQTPLVDAGLFAITGPTGAGKTTILDAITLALYGQVPR
HETSGPEHVMSHGTGESWAEVEFEVNDQQYRSKWGQYRARRKPEGNLQDSKMELSERKVA
EDGTETWVFLETYKSKVPAKVAELSGLEYKQFLRSVLLAQGDFTRFLKAPAGERAQLLEK
ITDTRKYSDISRAAFERAKQETQQVEQLRAGLTGLVLLSPEEVSFLETEIQELTTQLSTA
TAAQEQLREARQWQLRLRELRQKQQATQEQQQRLAAQSEALAPLRQRLAGHQQAAPFATD
FALLRQAEELVARLRREAGQLQEQLPQLEERRAAAEAARTAAHQAYEQAAGNRDQQEPKL
RAAEQLDLLLSEARQRLATGKQEYQERNALWKEQNREATHAAEQTRQHQHQAHELRDWLT
RHTVLSGTAEALAPLSGFLHDWQHVQAEIAELEHQVKTRQQLWATATATQASSAQQLQEV
ETQLSILATQYATATAARHDWRHQLTHHVARLHREEQALESSVQDLRRLTQAHQLILTHE
EARQQLTPGEPCPLCGAKEHPFTAGLLGVSHDSVQQDRQREQELTQQTVDLKGRINRLTS
ISGLLETDATLLTPETTVVRWLSVEEETSIPGTVRALVQELRALEQQQQQAQLTQTKAQA
DRHNAQQQQQQLGAELAGLTLRLNDSREQAPKIREMIVSLLSAFGLEFSGENGPALVQRL
ESVGAEFRQKQQEAEKLERELLLTQQRAETAQKHRDELQQELNQRREKLQLDHEAMQRQE
QQRRELLSEDDVARARQRLEDALRTADLHRQQAEQQFQQHETALTVAVDKRRQRELDVEH
QQQAHEERHAALTAGLTAAGLSPNPADLLPLLLPEPEAASLQNQLRRHEQDVALAEQTAQ
ETARQLQQEEARALTPEPLERIEELLTTHNQHLATLNQQLGQRQERLGSHQAGLERHAAL
AAELEKQQQEARRWRQLAELIGSADGKKFSEFAQGLTLARLIDLANRHLHRFIDRYRILR
NPEQHLDLLIQDEYQAGSARSMNSLSGGESFLVSLALALGLSELAGRKTQIDTLFIDEGF
GTLDPDTLDVALSALEMLQGTGKTIGIISHVEALKERVTTQINVRKGAGGFSSLQVLGFG
EEV
NT seq 3432 nt   +upstreamnt  +downstreamnt
atgaaaattctccgcgtccgcttttataatctgaactccctgcgcggggagcacaccgtt
gattttagccagacgccgctggtagatgcgggcctgtttgccattaccggccccaccggc
gcgggcaaaaccaccattctcgatgccattaccctggccctctacggccaggtgccccgc
cacgaaaccagcggcccagagcacgtcatgagccacggcaccggcgaaagctgggccgaa
gtggagttcgaagtaaacgaccagcaataccgctccaagtggggccagtaccgcgcccgc
cggaagccggaaggcaacctccaggattccaaaatggagctcagcgagcggaaagtagcg
gaggatggcacggaaacctgggtgtttctggaaacctataaatcgaaggttccggcaaaa
gtggccgagctgagcgggctggagtacaagcagttcctgcgctccgtgctgctggcccag
ggcgactttacccgctttctgaaagccccggccggggagcgggcccagctgctggagaaa
atcaccgacacccggaagtattccgacatctcgcgggccgcgtttgagcgcgccaagcag
gaaacccagcaggtggagcagctgcgcgccggcctgacgggtttggtgctgctctcgccg
gaagaagtgtcgtttctggaaaccgaaattcaggagctgaccacccaactgagtaccgcc
acggcggcccaggaacagctgcgcgaggcccggcagtggcagctgcgcctgcgggaattg
cgccagaaacagcaagccacgcaggaacagcagcaacggctggcagcacagtcagaagcg
ctggccccgttgcggcagcggctggccgggcaccagcaggcggccccttttgctactgat
tttgctttgttacggcaggccgaagagctggtagcccgtctgcgccgggaggccgggcag
ctgcaggagcagctcccgcagctggaagagcgccgcgccgcggcagaggcggcccgcacc
gcagcccaccaggcatatgaacaggccgcgggcaaccgggaccagcaggaaccaaagctg
cgtgccgccgaacagttggacctgctgctctccgaagcccggcagcgccttgcaaccggc
aagcaggaatatcaggagcgcaatgccctctggaaagagcagaaccgcgaagccactcac
gctgccgaacaaaccaggcagcaccagcaccaagcccatgagctgcgcgactggctcacg
cgccataccgtgctaagcggcacggcggaagccctggccccgctcagcggctttctgcac
gactggcagcacgtgcaggccgaaatagcagagctggagcaccaggtaaaaacgcggcag
cagctatgggctacggccaccgccacccaggccagcagcgcgcagcagctgcaggaggtg
gaaacgcagctcagcatccttgccacgcagtacgctaccgccaccgccgcccgccacgac
tggcggcaccagctcacgcaccacgtggcccggctgcaccgcgaagaacaggccctggaa
agcagcgtgcaggatttgcgccgcctcacgcaggcgcatcagctcattcttacccacgaa
gaagcccgacagcaactaacaccaggcgagccgtgccccttgtgcggcgcgaaggagcat
ccgtttacggcaggcctgctgggcgtaagtcacgattcggtgcagcaggaccgccagcgg
gaacaggagctgacccagcagacggtggatctgaaagggcgcatcaaccgccttacttcc
atcagtggcttgttggaaaccgatgcaaccctgcttacgccggaaaccacggtagtgcgg
tggctttcggtggaggaagaaacctctatccccggcaccgtgcgcgccttggtgcaggag
ctgcgcgccctggaacagcagcagcagcaggcccagcttactcaaaccaaagcccaggcc
gaccgccacaacgcccaacagcagcagcagcagctgggcgcggagttggcaggcctcacg
ctgcggctgaatgattcccgggagcaggcacccaaaatccgggaaatgattgtcagcctg
ctttctgcttttgggctggagttttcgggcgaaaatggcccggctctggtccagcgtttg
gaaagcgtaggggctgaattccgccagaagcaacaggaagcggaaaagctggagcgcgag
ctactgctgacccagcagcgcgccgaaaccgctcagaagcaccgcgacgagttgcagcag
gaattaaatcagcgccgcgaaaagctgcagctggaccatgaagccatgcagcgccaggag
cagcagcgccgggagctgctctccgaagacgatgtggcccgcgcccgccagcgcctggaa
gacgccctgcgcaccgccgacctgcaccgccagcaggccgagcagcagtttcagcagcac
gaaaccgctctgaccgtagccgtggacaagcggcgccagcgggagctggacgtagagcac
cagcagcaggcccacgaagaacgccacgcggcgcttacggcaggcctcaccgccgccggc
ctctcccccaaccccgccgacctgctgccgctgctcctgcccgaaccggaagccgccagc
ctgcagaaccagttgcgccgccacgagcaggacgtagcactggccgaacaaaccgcccag
gaaaccgcccggcagctgcagcaggaagaagcccgtgccctcacgccggagcccttagag
cgcatcgaagagcttttgactacccacaaccagcatctggccacgctcaaccagcagctg
ggccagcgacaggaacggctgggaagccatcaggcgggcctggaacggcacgccgccctg
gcggcggagctggaaaagcagcagcaggaagcccgccgctggcggcaactggcggagctc
atcggctcggccgatggcaagaagttcagcgagtttgctcagggcctcaccctggcccgc
ctcatcgacctagccaaccgccacctgcaccgcttcatcgaccggtaccgcatcctgcgc
aaccccgagcagcatctggacctgctgattcaggacgaataccaggccggttcggcgcgc
tccatgaattcgctgtcgggtggggaaagttttctggtgagtctggcactggcgctgggc
ctctcggagttggcgggccgcaaaacccagattgacaccctgtttattgacgaaggcttc
ggtacgctggaccccgacacgctggacgtggcactttcggccctagaaatgctgcagggc
acgggcaaaaccatcggtatcatctcccacgtggaggccctgaaggagcgcgtcaccacg
caaatcaacgtgcggaagggtgcaggcgggttcagctctttgcaggtgctgggctttggg
gaggaagtttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (18)   

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