KEGG   Hymenobacter sedentarius: AUC43_09375
Entry
AUC43_09375       CDS       T04242                                 
Name
(GenBank) rhamnogalacturonate lyase
  KO
K18197  rhamnogalacturonan endolyase [EC:4.2.2.23]
Organism
hyg  Hymenobacter sedentarius
Brite
KEGG Orthology (KO) [BR:hyg00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    AUC43_09375
Enzymes [BR:hyg01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.23  rhamnogalacturonan endolyase
     AUC43_09375
SSDB
Motif
Pfam: RGL11_C RGI_lyase FG-GAP_3 FG-GAP
Other DBs
NCBI-ProteinID: ALW87294
UniProt: A0A0U4CV34
Position
2244475..2246355
AA seq 626 aa
MPPAPQAQPERLGRGIVAIAQPDGKVFISWRLLASDAPGVGFNVYRTNGAGAPIKLNDQP
LTAGTNFLDIAGKTSSSKYFVRVAGAAATPDASDASALATAWSEGFLRVPLQPPPEGTVS
SGPETSAYTYTANDASAADLDGDGQYEIVLKWEPTNAHDNSQGGLTGPVILDAYKLDGTR
LWRINLGRNIRAGAHYTQFMVYDLDGDGKAEVACKTADGTVDGMGKAVGDATKDYRSLTV
PSDGPSVLTARDAKYGRILAGPEYFTVFNGLTGAALASTPYLPARGDLSGWGGLGGNGGN
DRYGNRADRFLAAVAYLDGSRPSVVMCRGYYGRTVLAAWDWRGGQLKSRWVFDSKDGKNP
FSGMGNHGLSVNDVDGDGKDEIVYGSMVVDDNGTGLYSTGLRHGDALHVSDLDPSTPGLE
AWGVHENEEKVPGYENGPGAAMYDARTGKTLFARLPGQDVGRGMAADIDPRYPGAEVWVS
NPELGLLTCKGERIGPSPRSVNFGLWWDGDLLRELLNDTRVEKWDYQAGQLNKPLEGKAF
GAASCNGSKATPCLSADLLGDWREEVVWRTANNSALLIFSSTIPTTHRLTTLMQDRAYRL
GVARENVGYNQPPHPGFFLGEGMKAL
NT seq 1881 nt   +upstreamnt  +downstreamnt
ttgcccccggccccccaggcgcagcccgaacggctggggcgcgggatagtagccattgcc
caacccgatggcaaggtgttcattagctggcgcctgctggcttctgacgcgcctggggtg
ggctttaacgtgtaccgcaccaacggcgccggagcccccatcaagctcaatgaccagccc
ctgactgcgggcaccaactttctggacatagccggcaaaacatcatcctcgaagtacttc
gtccgggtggccggagctgccgccactcccgatgcttcggacgcttctgcgctggctacc
gcttggagcgaaggcttcctgcgtgtgcctttgcaaccgccgcccgaaggcaccgtgagc
agcggccccgaaaccagcgcctacacctacaccgccaacgacgcctccgcggccgacctg
gacggcgacggccagtacgaaattgtgctgaaatgggagcccaccaacgcccacgacaac
agccagggcggcctcacgggccccgtcattcttgatgcgtataagctggacggcacccgc
ctctggcgcatcaatctgggccgaaacatccgggccggcgcgcactacacgcagttcatg
gtgtacgacctcgacggcgatggcaaagccgaagtggcctgcaaaaccgccgatggcacc
gtcgatggcatgggcaaagctgtgggcgatgctaccaaagactaccgctcgctcactgtg
cccagcgacggccccagcgtgctcacggcccgcgatgccaagtacggccgcatcttggcc
gggccagagtatttcacggtgttcaacggtctcactggcgcggcgctagccagcacgccc
tacctgcccgcccgtggcgacctgagcggctggggcggcctcggcggcaacggaggcaac
gaccgctacggcaaccgtgccgaccgattcctggccgccgtggcctacctcgacggcagc
cggcccagcgtggtgatgtgccgcggctactacggccgcactgtgctggccgcctgggac
tggcgcggtggccagctcaagtcgcgctgggtcttcgactcgaaagatggcaagaatccc
ttttccggcatgggcaaccacggcctgagcgtgaacgatgtggacggcgacggcaaagac
gaaatcgtgtacggctcgatggtggtcgacgacaatggcacggggctctacagcaccggc
ctgcgccacggcgacgccctgcacgtgagcgacctcgaccccagcacgcccggcctggaa
gcctggggcgtgcacgaaaacgaagagaaagtgcccggctacgaaaacggccccggggcc
gcgatgtacgatgcccgaaccggcaaaaccctcttcgcccggctgcccggccaggacgtg
ggccgcggcatggccgccgacatcgacccgcgctaccccggcgccgaagtctgggtaagc
aacccggaattgggcctgctcacctgcaagggcgagcgcatcggcccgtcgccgcgctcc
gtgaactttggcctgtggtgggatggggatttgctgcgtgagctgctcaacgacacccgc
gtggaaaagtgggactaccaggccggccagctcaacaagccgcttgagggcaaagccttc
ggtgccgcgtcctgcaacggcagcaaagccacgccctgcctcagcgccgacctgctgggc
gactggcgcgaggaagtagtctggcgcaccgccaacaactccgcgctgctgattttcagc
agcaccattcccaccacgcaccgcctcaccacgctgatgcaggaccgcgcctaccgcctt
ggcgtggcccgcgaaaacgtgggctacaaccagccgccgcaccccggcttttttctgggc
gaaggcatgaaagccctgtag

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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